RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C YFL067WP43537 175 aa2.11□□□□□ -2.07
SSM4YIL030C RPL38P49167 78 aaKnown RBP2.1□□□□□ -2.07
SSM4YIL030C MRX7P53869 86 aa2.1□□□□□ -2.07
SSM4YIL030C YMR230W-AQ3E7B5 62 aa2.1□□□□□ -2.07
SSM4YIL030C YOR316C-AQ3E806 69 aa2.08□□□□□ -2.08
SSM4YIL030C YJR128WP47162 119 aa2.08□□□□□ -2.08
SSM4YIL030C Q0032Q9ZZX7 96 aa2.08□□□□□ -2.08
SSM4YIL030C YIL156W-BQ2V2P4 73 aa2.08□□□□□ -2.08
SSM4YIL030C YLR157W-DP0CE99 70 aa2.07□□□□□ -2.08
SSM4YIL030C MRP10O75012 95 aa2.06□□□□□ -2.08
SSM4YIL030C YFR032C-BQ8TGU2 87 aa2.04□□□□□ -2.08
SSM4YIL030C YGL034CP53186 121 aa2.04□□□□□ -2.08
SSM4YIL030C YDR010CQ12426 110 aa2.04□□□□□ -2.08
SSM4YIL030C YDR210WQ03482 75 aa2.02□□□□□ -2.09
SSM4YIL030C TOR1P35169 2470 aa2.01□□□□□ -2.09
SSM4YIL030C YIL102CP40488 101 aa2□□□□□ -2.09
SSM4YIL030C YNL122CP53921 115 aaPredicted RBP2□□□□□ -2.09
SSM4YIL030C SNA2P56508 79 aa2□□□□□ -2.09
SSM4YIL030C QCR10P37299 77 aa1.99□□□□□ -2.09
SSM4YIL030C YCR095W-AQ3E787 52 aa1.99□□□□□ -2.09
SSM4YIL030C LCL1Q02786 101 aa1.98□□□□□ -2.09
SSM4YIL030C FYV12Q08559 129 aa1.98□□□□□ -2.09
SSM4YIL030C YDR034C-AP0C289 58 aa1.98□□□□□ -2.09
SSM4YIL030C YCL042WP25572 119 aa1.98□□□□□ -2.09
SSM4YIL030C CUP1-1P0CX80 61 aa1.97□□□□□ -2.09
SSM4YIL030C CUP1-2P0CX81 61 aa1.97□□□□□ -2.09
SSM4YIL030C DDR48P18899 430 aaKnown RBP1.95□□□□□ -2.1
SSM4YIL030C TOR2P32600 2474 aaKnown RBP1.95□□□□□ -2.1
SSM4YIL030C YPR195CQ06594 109 aa1.95□□□□□ -2.1
SSM4YIL030C COX8P04039 78 aa1.94□□□□□ -2.1
SSM4YIL030C YOR376W-AQ3E805 51 aa1.94□□□□□ -2.1
SSM4YIL030C RPL37AP49166 88 aaKnown RBP1.94□□□□□ -2.1
SSM4YIL030C YGL014C-AP0C5N1 53 aa1.93□□□□□ -2.1
SSM4YIL030C YLR122CQ12312 125 aa1.93□□□□□ -2.1
SSM4YIL030C YBR201C-AQ2V2Q3 67 aa1.91□□□□□ -2.1
SSM4YIL030C YOR394C-AQ8TGJ0 55 aa1.9□□□□□ -2.11
SSM4YIL030C SOM1Q05676 74 aa1.86□□□□□ -2.11
SSM4YIL030C YCR108CQ3E819 63 aa1.85□□□□□ -2.11
SSM4YIL030C OLI1P61829 76 aa1.83□□□□□ -2.12
SSM4YIL030C YJL009WP47078 108 aa1.83□□□□□ -2.12
SSM4YIL030C PRP8P33334 2413 aaKnown RBP1.82□□□□□ -2.12
SSM4YIL030C COX7P10174 60 aa1.82□□□□□ -2.12
SSM4YIL030C YJL144WP47009 104 aa1.81□□□□□ -2.12
SSM4YIL030C YBL044WP38194 122 aa1.75□□□□□ -2.13
SSM4YIL030C YEL014CP39999 101 aa1.75□□□□□ -2.13
SSM4YIL030C Q0017Q9ZZX8 53 aa1.75□□□□□ -2.13
SSM4YIL030C UTP20P35194 2493 aaKnown RBP1.74□□□□□ -2.13
SSM4YIL030C YBR072C-AQ3E794 53 aa1.72□□□□□ -2.13
SSM4YIL030C MEC1P38111 2368 aa1.69□□□□□ -2.14
SSM4YIL030C YML054C-AQ3E809 52 aa1.64□□□□□ -2.15
SSM4YIL030C CMC4Q3E7A9 73 aa1.62□□□□□ -2.15
SSM4YIL030C YOR072W-BQ3E832 53 aa1.61□□□□□ -2.15
SSM4YIL030C YER078W-AQ3E7A2 54 aa1.59□□□□□ -2.16
SSM4YIL030C HHY1P39982 102 aa1.57□□□□□ -2.16
SSM4YIL030C YER175W-AQ8TGU4 54 aa1.54□□□□□ -2.16
SSM4YIL030C YHR032W-AP0C5N6 59 aa1.47□□□□□ -2.17
SSM4YIL030C YAL067W-AQ8TGK6 75 aa1.38□□□□□ -2.19
SSM4YIL030C RPS29AP41057 56 aaKnown RBP1.32□□□□□ -2.2
SSM4YIL030C YOL164W-AQ3E7A5 60 aa1.31□□□□□ -2.2
SSM4YIL030C YHR050W-AQ05451 56 aa1.28□□□□□ -2.2
SSM4YIL030C RPS29BP41058 56 aaKnown RBP1.17□□□□□ -2.22
SSM4YIL030C YLR157W-EP0CF00 54 aa1.15□□□□□ -2.22
SSM4YIL030C YHR086W-AQ3E746 53 aa1.1□□□□□ -2.23
Retrieved 63 of 5,963 RNA–protein pairs in 15.4 ms