RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W YGR146C-AQ8TGT9 53 aa1.78□□□□□ -2.12
TRA1YHR099W YBR200W-AQ3E755 54 aa1.78□□□□□ -2.12
TRA1YHR099W YOR394C-AQ8TGJ0 55 aa1.78□□□□□ -2.13
TRA1YHR099W TOR1P35169 2470 aa1.77□□□□□ -2.13
TRA1YHR099W HUA1P40325 198 aa1.77□□□□□ -2.13
TRA1YHR099W YER145C-AA0A023PYF4 145 aa1.77□□□□□ -2.13
TRA1YHR099W YER188C-AP0C0V2 99 aa1.77□□□□□ -2.13
TRA1YHR099W YGL014C-AP0C5N1 53 aa1.77□□□□□ -2.13
TRA1YHR099W YHR050W-AQ05451 56 aa1.76□□□□□ -2.13
TRA1YHR099W YOL085CQ99345 113 aa1.76□□□□□ -2.13
TRA1YHR099W YML100W-AQ8TGT0 57 aa1.76□□□□□ -2.13
TRA1YHR099W YEL045CP32616 141 aa1.75□□□□□ -2.13
TRA1YHR099W YNR077CP53758 84 aa1.75□□□□□ -2.13
TRA1YHR099W YHR212W-AP0CX91 67 aa1.74□□□□□ -2.13
TRA1YHR099W TOR2P32600 2474 aaKnown RBP1.74□□□□□ -2.13
TRA1YHR099W GAT4P40569 121 aa1.73□□□□□ -2.13
TRA1YHR099W FMP27Q06179 2628 aa1.73□□□□□ -2.13
TRA1YHR099W WWM1P43582 211 aaKnown RBP1.73□□□□□ -2.13
TRA1YHR099W YIL046W-AQ3E7Z4 54 aa1.72□□□□□ -2.13
TRA1YHR099W PRP8P33334 2413 aaKnown RBP1.72□□□□□ -2.13
TRA1YHR099W YHR073W-AP0C5N7 58 aa1.72□□□□□ -2.13
TRA1YHR099W MEC1P38111 2368 aa1.71□□□□□ -2.14
TRA1YHR099W YDL022C-AP0C5L6 82 aa1.71□□□□□ -2.14
TRA1YHR099W YJR128WP47162 119 aa1.71□□□□□ -2.14
TRA1YHR099W NOP10Q6Q547 58 aaPredicted RBP1.71□□□□□ -2.14
TRA1YHR099W YER078W-AQ3E7A2 54 aa1.7□□□□□ -2.14
TRA1YHR099W TDA8Q6B2U8 126 aa1.7□□□□□ -2.14
TRA1YHR099W RPS29BP41058 56 aaKnown RBP1.69□□□□□ -2.14
TRA1YHR099W YDR115WQ04598 105 aa1.69□□□□□ -2.14
TRA1YHR099W YOL013W-AP0C272 63 aaPredicted RBP1.68□□□□□ -2.14
TRA1YHR099W YOL164W-AQ3E7A5 60 aa1.67□□□□□ -2.14
TRA1YHR099W YLR157W-EP0CF00 54 aa1.67□□□□□ -2.14
TRA1YHR099W YDR246W-AQ3E763 66 aa1.67□□□□□ -2.14
TRA1YHR099W RRT15Q3E811 62 aa1.65□□□□□ -2.14
TRA1YHR099W RPS29AP41057 56 aaKnown RBP1.65□□□□□ -2.15
TRA1YHR099W GIS2P53849 153 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
TRA1YHR099W AUA1P32450 94 aa1.64□□□□□ -2.15
TRA1YHR099W RDS3Q06835 107 aaPredicted RBP1.64□□□□□ -2.15
TRA1YHR099W Q0297Q9ZZV8 51 aa1.64□□□□□ -2.15
TRA1YHR099W YDR034W-BQ6Q5X2 51 aa1.64□□□□□ -2.15
TRA1YHR099W YOR376W-AQ3E805 51 aa1.62□□□□□ -2.15
TRA1YHR099W TOM1Q03280 3268 aa1.61□□□□□ -2.15
TRA1YHR099W YBR016WP38216 128 aa1.6□□□□□ -2.15
TRA1YHR099W YOL166W-AQ8TGJ1 51 aa1.57□□□□□ -2.16
TRA1YHR099W NUM1Q00402 2748 aa1.56□□□□□ -2.16
TRA1YHR099W YPR195CQ06594 109 aa1.56□□□□□ -2.16
TRA1YHR099W YMR230W-AQ3E7B5 62 aa1.54□□□□□ -2.16
TRA1YHR099W YLL066W-BQ8TGJ7 56 aa1.53□□□□□ -2.16
TRA1YHR099W RPL37AP49166 88 aaKnown RBP1.53□□□□□ -2.16
TRA1YHR099W YDL012CQ12489 107 aa1.51□□□□□ -2.17
TRA1YHR099W RPL37BP51402 88 aaKnown RBP1.5□□□□□ -2.17
TRA1YHR099W YCR108CQ3E819 63 aa1.48□□□□□ -2.17
TRA1YHR099W TEL1P38110 2787 aa1.47□□□□□ -2.17
TRA1YHR099W YDR210WQ03482 75 aa1.45□□□□□ -2.18
TRA1YHR099W YHR086W-AQ3E746 53 aa1.34□□□□□ -2.2
TRA1YHR099W VPS13Q07878 3144 aa1.27□□□□□ -2.21
TRA1YHR099W IRA2P19158 3079 aa1.27□□□□□ -2.21
TRA1YHR099W YBR056W-AI2HB52 66 aa1.27□□□□□ -2.21
TRA1YHR099W CSF1Q12150 2958 aa1.2□□□□□ -2.22
TRA1YHR099W DYN1P36022 4092 aa1.12□□□□□ -2.23
TRA1YHR099W IRA1P18963 3092 aa1.1□□□□□ -2.23
TRA1YHR099W TRA1P38811 3744 aa1.07□□□□□ -2.24
TRA1YHR099W MDN1Q12019 4910 aaKnown RBP1.02□□□□□ -2.25
Retrieved 63 of 5,963 RNA–protein pairs in 68.9 ms