RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B YHR086W-AQ3E746 53 aa0.87□□□□□ -2.27
YGR109W-BYGR109W-B TOR1P35169 2470 aa0.87□□□□□ -2.27
YGR109W-BYGR109W-B YOR316C-AQ3E806 69 aa0.86□□□□□ -2.27
YGR109W-BYGR109W-B NOP10Q6Q547 58 aaPredicted RBP0.86□□□□□ -2.27
YGR109W-BYGR109W-B YOR034C-AQ3E735 80 aa0.86□□□□□ -2.27
YGR109W-BYGR109W-B ACC1Q00955 2233 aaKnown RBP0.86□□□□□ -2.27
YGR109W-BYGR109W-B YBR200W-AQ3E755 54 aa0.86□□□□□ -2.27
YGR109W-BYGR109W-B YLR146W-AQ2V2P1 62 aa0.85□□□□□ -2.27
YGR109W-BYGR109W-B YIL046W-AQ3E7Z4 54 aa0.85□□□□□ -2.27
YGR109W-BYGR109W-B MVB12P42939 101 aa0.85□□□□□ -2.27
YGR109W-BYGR109W-B HUG1Q6Q5K6 68 aa0.85□□□□□ -2.27
YGR109W-BYGR109W-B UBR1P19812 1950 aa0.85□□□□□ -2.27
YGR109W-BYGR109W-B YHR212W-AP0CX91 67 aa0.84□□□□□ -2.27
YGR109W-BYGR109W-B RPL37BP51402 88 aaKnown RBP0.84□□□□□ -2.28
YGR109W-BYGR109W-B YOL013W-AP0C272 63 aaPredicted RBP0.83□□□□□ -2.28
YGR109W-BYGR109W-B HUA1P40325 198 aa0.83□□□□□ -2.28
YGR109W-BYGR109W-B YIL156W-BQ2V2P4 73 aa0.83□□□□□ -2.28
YGR109W-BYGR109W-B RPS30AP0CX33 63 aaKnown RBP0.82□□□□□ -2.28
YGR109W-BYGR109W-B RPS30BP0CX34 63 aaKnown RBP0.82□□□□□ -2.28
YGR109W-BYGR109W-B YLR285C-AQ3E771 56 aa0.81□□□□□ -2.28
YGR109W-BYGR109W-B YGR146C-AQ8TGT9 53 aa0.81□□□□□ -2.28
YGR109W-BYGR109W-B SLH1P53327 1967 aaKnown RBP0.81□□□□□ -2.28
YGR109W-BYGR109W-B YJR146WP47174 117 aa0.81□□□□□ -2.28
YGR109W-BYGR109W-B YBR201C-AQ2V2Q3 67 aa0.8□□□□□ -2.28
YGR109W-BYGR109W-B YBL044WP38194 122 aa0.8□□□□□ -2.28
YGR109W-BYGR109W-B YJL133C-AQ3E7A3 74 aa0.8□□□□□ -2.28
YGR109W-BYGR109W-B YOR376W-AQ3E805 51 aa0.8□□□□□ -2.28
YGR109W-BYGR109W-B SEC16P48415 2195 aaKnown RBP0.79□□□□□ -2.28
YGR109W-BYGR109W-B BRR2P32639 2163 aaKnown RBP0.78□□□□□ -2.28
YGR109W-BYGR109W-B YFR009W-AP0C5M9 85 aa0.77□□□□□ -2.29
YGR109W-BYGR109W-B BEM2P39960 2167 aaKnown RBP0.77□□□□□ -2.29
YGR109W-BYGR109W-B YBR016WP38216 128 aa0.77□□□□□ -2.29
YGR109W-BYGR109W-B RPC10P40422 70 aa0.77□□□□□ -2.29
YGR109W-BYGR109W-B RPL37AP49166 88 aaKnown RBP0.77□□□□□ -2.29
YGR109W-BYGR109W-B YJL127C-BQ3E828 52 aa0.76□□□□□ -2.29
YGR109W-BYGR109W-B YDR034C-AP0C289 58 aa0.75□□□□□ -2.29
YGR109W-BYGR109W-B TAO3P40468 2376 aa0.75□□□□□ -2.29
YGR109W-BYGR109W-B RRT15Q3E811 62 aa0.74□□□□□ -2.29
YGR109W-BYGR109W-B YLL006W-AQ3E814 58 aa0.74□□□□□ -2.29
YGR109W-BYGR109W-B RPS27AP35997 82 aaKnown RBP0.73□□□□□ -2.29
YGR109W-BYGR109W-B AUA1P32450 94 aa0.72□□□□□ -2.29
YGR109W-BYGR109W-B PRP8P33334 2413 aaKnown RBP0.71□□□□□ -2.3
YGR109W-BYGR109W-B YLR157W-EP0CF00 54 aa0.71□□□□□ -2.3
YGR109W-BYGR109W-B TOR2P32600 2474 aaKnown RBP0.71□□□□□ -2.3
YGR109W-BYGR109W-B RPS27BP38711 82 aa0.71□□□□□ -2.3
YGR109W-BYGR109W-B NCE101Q02820 53 aa0.7□□□□□ -2.3
YGR109W-BYGR109W-B TOM7P53507 60 aa0.69□□□□□ -2.3
YGR109W-BYGR109W-B CYR1P08678 2026 aaKnown RBP0.68□□□□□ -2.3
YGR109W-BYGR109W-B SEN1Q00416 2231 aaKnown RBP0.68□□□□□ -2.3
YGR109W-BYGR109W-B Q0297Q9ZZV8 51 aa0.68□□□□□ -2.3
YGR109W-BYGR109W-B CDC39P25655 2108 aaKnown RBP0.67□□□□□ -2.3
YGR109W-BYGR109W-B YLL066W-BQ8TGJ7 56 aa0.64□□□□□ -2.31
YGR109W-BYGR109W-B UTP20P35194 2493 aaKnown RBP0.62□□□□□ -2.31
YGR109W-BYGR109W-B YOL164W-AQ3E7A5 60 aa0.61□□□□□ -2.31
YGR109W-BYGR109W-B POL2P21951 2222 aaKnown RBP0.58□□□□□ -2.32
YGR109W-BYGR109W-B YCR108CQ3E819 63 aa0.57□□□□□ -2.32
YGR109W-BYGR109W-B BLM10P43583 2143 aa0.57□□□□□ -2.32
YGR109W-BYGR109W-B HFA1P32874 2273 aa0.55□□□□□ -2.32
YGR109W-BYGR109W-B FAS1P07149 2051 aaKnown RBP0.55□□□□□ -2.32
YGR109W-BYGR109W-B MEC1P38111 2368 aa0.54□□□□□ -2.32
YGR109W-BYGR109W-B RPL39P04650 51 aa0.54□□□□□ -2.32
YGR109W-BYGR109W-B URA2P07259 2214 aaKnown RBP0.5□□□□□ -2.33
YGR109W-BYGR109W-B BPH1P25356 2167 aa0.37□□□□□ -2.35
Retrieved 63 of 5,963 RNA–protein pairs in 5 ms