RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W RPS28BP0C0X0 67 aaKnown RBP3.44□□□□□ -1.86
CDC43YGL155W RPS28AQ3E7X9 67 aaPredicted RBP3.44□□□□□ -1.86
CDC43YGL155W YMR122CQ03879 124 aa3.43□□□□□ -1.86
CDC43YGL155W YDL012CQ12489 107 aa3.43□□□□□ -1.86
CDC43YGL155W YGL149WP53116 101 aa3.42□□□□□ -1.86
CDC43YGL155W YMR001C-AQ8TGS9 76 aa3.42□□□□□ -1.86
CDC43YGL155W YHR073W-AP0C5N7 58 aa3.41□□□□□ -1.86
CDC43YGL155W OST5Q92316 86 aa3.4□□□□□ -1.87
CDC43YGL155W YFR032C-BQ8TGU2 87 aa3.39□□□□□ -1.87
CDC43YGL155W YER188C-AP0C0V2 99 aa3.38□□□□□ -1.87
CDC43YGL155W YDR010CQ12426 110 aa3.36□□□□□ -1.87
CDC43YGL155W YGR146C-AQ8TGT9 53 aa3.36□□□□□ -1.87
CDC43YGL155W COX7P10174 60 aa3.35□□□□□ -1.87
CDC43YGL155W YJR128WP47162 119 aa3.35□□□□□ -1.87
CDC43YGL155W YCR095W-AQ3E787 52 aa3.35□□□□□ -1.87
CDC43YGL155W DYN1P36022 4092 aa3.34□□□□□ -1.87
CDC43YGL155W COX8P04039 78 aa3.33□□□□□ -1.88
CDC43YGL155W DDR48P18899 430 aaKnown RBP3.33□□□□□ -1.88
CDC43YGL155W YNL277W-AQ3E7Z0 62 aa3.33□□□□□ -1.88
CDC43YGL155W YOR316C-AQ3E806 69 aa3.33□□□□□ -1.88
CDC43YGL155W YLR255CO13574 117 aa3.32□□□□□ -1.88
CDC43YGL155W YER175W-AQ8TGU4 54 aa3.32□□□□□ -1.88
CDC43YGL155W YBR201C-AQ2V2Q3 67 aa3.31□□□□□ -1.88
CDC43YGL155W MRX7P53869 86 aa3.27□□□□□ -1.89
CDC43YGL155W YBL008W-AQ3E821 79 aa3.27□□□□□ -1.89
CDC43YGL155W OLI1P61829 76 aa3.26□□□□□ -1.89
CDC43YGL155W ATP17Q06405 101 aa3.26□□□□□ -1.89
CDC43YGL155W YNL122CP53921 115 aaPredicted RBP3.24□□□□□ -1.89
CDC43YGL155W YIL156W-BQ2V2P4 73 aa3.24□□□□□ -1.89
CDC43YGL155W YBR016WP38216 128 aa3.22□□□□□ -1.89
CDC43YGL155W YFL067WP43537 175 aa3.21□□□□□ -1.9
CDC43YGL155W YJL144WP47009 104 aa3.19□□□□□ -1.9
CDC43YGL155W RPL37BP51402 88 aaKnown RBP3.19□□□□□ -1.9
CDC43YGL155W FYV12Q08559 129 aa3.16□□□□□ -1.9
CDC43YGL155W YML100W-AQ8TGT0 57 aa3.14□□□□□ -1.91
CDC43YGL155W CMC4Q3E7A9 73 aa3.11□□□□□ -1.91
CDC43YGL155W YOR376W-AQ3E805 51 aa3.08□□□□□ -1.92
CDC43YGL155W YEL014CP39999 101 aa3.07□□□□□ -1.92
CDC43YGL155W QCR10P37299 77 aa3.04□□□□□ -1.92
CDC43YGL155W YGL034CP53186 121 aa3.04□□□□□ -1.92
CDC43YGL155W YOR394C-AQ8TGJ0 55 aa3.03□□□□□ -1.92
CDC43YGL155W Q0017Q9ZZX8 53 aa3.03□□□□□ -1.92
CDC43YGL155W YGL014C-AP0C5N1 53 aa3.02□□□□□ -1.93
CDC43YGL155W YBL044WP38194 122 aa3□□□□□ -1.93
CDC43YGL155W YCR108CQ3E819 63 aa3□□□□□ -1.93
CDC43YGL155W YML054C-AQ3E809 52 aa2.98□□□□□ -1.93
CDC43YGL155W SOM1Q05676 74 aa2.92□□□□□ -1.94
CDC43YGL155W YJL009WP47078 108 aa2.91□□□□□ -1.94
CDC43YGL155W RPL37AP49166 88 aaKnown RBP2.91□□□□□ -1.94
CDC43YGL155W YOR072W-BQ3E832 53 aa2.86□□□□□ -1.95
CDC43YGL155W YDR210WQ03482 75 aa2.78□□□□□ -1.96
CDC43YGL155W MDN1Q12019 4910 aaKnown RBP2.78□□□□□ -1.96
CDC43YGL155W YBR072C-AQ3E794 53 aa2.77□□□□□ -1.97
CDC43YGL155W HHY1P39982 102 aa2.75□□□□□ -1.97
CDC43YGL155W YER078W-AQ3E7A2 54 aa2.68□□□□□ -1.98
CDC43YGL155W RPS29BP41058 56 aaKnown RBP2.34□□□□□ -2.03
CDC43YGL155W YHR050W-AQ05451 56 aa2.31□□□□□ -2.04
CDC43YGL155W RPS29AP41057 56 aaKnown RBP2.21□□□□□ -2.06
CDC43YGL155W YAL067W-AQ8TGK6 75 aa2.21□□□□□ -2.06
CDC43YGL155W YOL164W-AQ3E7A5 60 aa2.17□□□□□ -2.06
CDC43YGL155W YHR032W-AP0C5N6 59 aa2.09□□□□□ -2.07
CDC43YGL155W YLR157W-EP0CF00 54 aa1.96□□□□□ -2.1
CDC43YGL155W YHR086W-AQ3E746 53 aa1.57□□□□□ -2.16
Retrieved 63 of 5,963 RNA–protein pairs in 26.2 ms