RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W COA2Q3E823 68 aa1.95□□□□□ -2.1
PTR3YFR029W YOR011W-AQ3E807 68 aa1.94□□□□□ -2.1
PTR3YFR029W YOR394C-AQ8TGJ0 55 aa1.93□□□□□ -2.1
PTR3YFR029W YPR010C-AA5Z2X5 72 aa1.92□□□□□ -2.1
PTR3YFR029W TEL1P38110 2787 aa1.92□□□□□ -2.1
PTR3YFR029W SEN1Q00416 2231 aaKnown RBP1.91□□□□□ -2.1
PTR3YFR029W RPS27BP38711 82 aa1.91□□□□□ -2.1
PTR3YFR029W RPL43AP0CX25 92 aaKnown RBP1.9□□□□□ -2.11
PTR3YFR029W RPL43BP0CX26 92 aa1.9□□□□□ -2.11
PTR3YFR029W TOS6P48560 102 aa1.9□□□□□ -2.11
PTR3YFR029W GCN1P33892 2672 aaKnown RBP1.89□□□□□ -2.11
PTR3YFR029W YIL046W-AQ3E7Z4 54 aa1.88□□□□□ -2.11
PTR3YFR029W NCE101Q02820 53 aa1.88□□□□□ -2.11
PTR3YFR029W COX9P07255 59 aa1.87□□□□□ -2.11
PTR3YFR029W YFR009W-AP0C5M9 85 aa1.86□□□□□ -2.11
PTR3YFR029W YGR025WP53216 100 aa1.86□□□□□ -2.11
PTR3YFR029W TRA1P38811 3744 aa1.85□□□□□ -2.11
PTR3YFR029W YOL164W-AQ3E7A5 60 aa1.85□□□□□ -2.11
PTR3YFR029W PRP8P33334 2413 aaKnown RBP1.85□□□□□ -2.11
PTR3YFR029W YLR307C-AQ3E825 87 aa1.84□□□□□ -2.11
PTR3YFR029W YLR157W-EP0CF00 54 aa1.84□□□□□ -2.12
PTR3YFR029W TOR1P35169 2470 aa1.83□□□□□ -2.12
PTR3YFR029W YBR056W-AI2HB52 66 aa1.82□□□□□ -2.12
PTR3YFR029W TOM7P53507 60 aa1.81□□□□□ -2.12
PTR3YFR029W NUM1Q00402 2748 aa1.81□□□□□ -2.12
PTR3YFR029W RPL37AP49166 88 aaKnown RBP1.81□□□□□ -2.12
PTR3YFR029W OLI1P61829 76 aa1.81□□□□□ -2.12
PTR3YFR029W MEC1P38111 2368 aa1.8□□□□□ -2.12
PTR3YFR029W YBR230W-AQ3E762 66 aa1.79□□□□□ -2.12
PTR3YFR029W YOR008C-AQ3E7B9 74 aa1.79□□□□□ -2.12
PTR3YFR029W YLR342W-AQ3E810 57 aa1.78□□□□□ -2.12
PTR3YFR029W YBR016WP38216 128 aa1.78□□□□□ -2.13
PTR3YFR029W SIP18P50263 79 aa1.76□□□□□ -2.13
PTR3YFR029W RPL39P04650 51 aa1.75□□□□□ -2.13
PTR3YFR029W YCR108CQ3E819 63 aa1.75□□□□□ -2.13
PTR3YFR029W YMR105W-AQ8TGS8 64 aa1.74□□□□□ -2.13
PTR3YFR029W YJL133C-AQ3E7A3 74 aa1.73□□□□□ -2.13
PTR3YFR029W YBL044WP38194 122 aa1.73□□□□□ -2.13
PTR3YFR029W UTP20P35194 2493 aaKnown RBP1.72□□□□□ -2.13
PTR3YFR029W YLL006W-AQ3E814 58 aa1.7□□□□□ -2.14
PTR3YFR029W YGL258W-AQ3E740 77 aa1.69□□□□□ -2.14
PTR3YFR029W YGR146C-AQ8TGT9 53 aa1.66□□□□□ -2.14
PTR3YFR029W RPL37BP51402 88 aaKnown RBP1.65□□□□□ -2.15
PTR3YFR029W DDR2P89113 61 aa1.64□□□□□ -2.15
PTR3YFR029W Q0297Q9ZZV8 51 aa1.63□□□□□ -2.15
PTR3YFR029W CUP1-1P0CX80 61 aa1.61□□□□□ -2.15
PTR3YFR029W CUP1-2P0CX81 61 aa1.61□□□□□ -2.15
PTR3YFR029W RPL29P05747 59 aaPredicted RBP1.59□□□□□ -2.15
PTR3YFR029W YJL127C-BQ3E828 52 aa1.59□□□□□ -2.16
PTR3YFR029W HOR7Q05827 59 aa1.58□□□□□ -2.16
PTR3YFR029W YOR316C-AQ3E806 69 aa1.53□□□□□ -2.16
PTR3YFR029W PMP3P87284 55 aa1.49□□□□□ -2.17
PTR3YFR029W DYN1P36022 4092 aa1.48□□□□□ -2.17
PTR3YFR029W YOR072W-BQ3E832 53 aa1.47□□□□□ -2.17
PTR3YFR029W YLL066W-BQ8TGJ7 56 aa1.47□□□□□ -2.17
PTR3YFR029W YHR073W-AP0C5N7 58 aa1.42□□□□□ -2.18
PTR3YFR029W RPS29BP41058 56 aaKnown RBP1.41□□□□□ -2.18
PTR3YFR029W YDR034C-AP0C289 58 aa1.39□□□□□ -2.19
PTR3YFR029W MDN1Q12019 4910 aaKnown RBP1.32□□□□□ -2.2
PTR3YFR029W RPS29AP41057 56 aaKnown RBP1.16□□□□□ -2.22
PTR3YFR029W YML054C-AQ3E809 52 aa1.11□□□□□ -2.23
PTR3YFR029W YHR050W-AQ05451 56 aa1.08□□□□□ -2.24
PTR3YFR029W Q0017Q9ZZX8 53 aa1.08□□□□□ -2.24
Retrieved 63 of 5,963 RNA–protein pairs in 14.8 ms