RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W YLR412C-AQ3E742 68 aa4.18□□□□□ -1.74
RGD2YFL047W YKL065W-AQ2V2P2 73 aa4.16□□□□□ -1.74
RGD2YFL047W YBR121C-AP0C5L4 52 aa4.15□□□□□ -1.74
RGD2YFL047W YJR128WP47162 119 aa4.15□□□□□ -1.74
RGD2YFL047W YGL149WP53116 101 aa4.15□□□□□ -1.74
RGD2YFL047W HHF1P02309 103 aaKnown RBP4.15□□□□□ -1.75
RGD2YFL047W RPS28BP0C0X0 67 aaKnown RBP4.15□□□□□ -1.75
RGD2YFL047W RPS28AQ3E7X9 67 aaPredicted RBP4.15□□□□□ -1.75
RGD2YFL047W YMR001C-AQ8TGS9 76 aa4.15□□□□□ -1.75
RGD2YFL047W YHR073W-AP0C5N7 58 aa4.13□□□□□ -1.75
RGD2YFL047W DDR48P18899 430 aaKnown RBP4.13□□□□□ -1.75
RGD2YFL047W YER188C-AP0C0V2 99 aa4.13□□□□□ -1.75
RGD2YFL047W HUB1Q6Q546 73 aa4.11□□□□□ -1.75
RGD2YFL047W YFR032C-BQ8TGU2 87 aa4.11□□□□□ -1.75
RGD2YFL047W OST5Q92316 86 aa4.1□□□□□ -1.75
RGD2YFL047W YLR255CO13574 117 aa4.09□□□□□ -1.76
RGD2YFL047W YOR316C-AQ3E806 69 aa4.08□□□□□ -1.76
RGD2YFL047W YGR146C-AQ8TGT9 53 aa4.07□□□□□ -1.76
RGD2YFL047W YCR095W-AQ3E787 52 aa4.02□□□□□ -1.77
RGD2YFL047W COX8P04039 78 aa4.01□□□□□ -1.77
RGD2YFL047W YNL122CP53921 115 aaPredicted RBP4□□□□□ -1.77
RGD2YFL047W YNL277W-AQ3E7Z0 62 aa4□□□□□ -1.77
RGD2YFL047W YBL008W-AQ3E821 79 aa3.99□□□□□ -1.77
RGD2YFL047W YJL144WP47009 104 aa3.98□□□□□ -1.77
RGD2YFL047W YBR201C-AQ2V2Q3 67 aa3.98□□□□□ -1.77
RGD2YFL047W YBR016WP38216 128 aa3.96□□□□□ -1.78
RGD2YFL047W COX7P10174 60 aa3.95□□□□□ -1.78
RGD2YFL047W YIL156W-BQ2V2P4 73 aa3.94□□□□□ -1.78
RGD2YFL047W ATP17Q06405 101 aa3.93□□□□□ -1.78
RGD2YFL047W YFL067WP43537 175 aa3.92□□□□□ -1.78
RGD2YFL047W OLI1P61829 76 aa3.91□□□□□ -1.78
RGD2YFL047W RPL37BP51402 88 aaKnown RBP3.9□□□□□ -1.79
RGD2YFL047W FYV12Q08559 129 aa3.9□□□□□ -1.79
RGD2YFL047W MRX7P53869 86 aa3.89□□□□□ -1.79
RGD2YFL047W YGL034CP53186 121 aa3.83□□□□□ -1.8
RGD2YFL047W YOR376W-AQ3E805 51 aa3.81□□□□□ -1.8
RGD2YFL047W YML100W-AQ8TGT0 57 aa3.79□□□□□ -1.8
RGD2YFL047W YEL014CP39999 101 aa3.7□□□□□ -1.82
RGD2YFL047W YCR108CQ3E819 63 aa3.69□□□□□ -1.82
RGD2YFL047W CMC4Q3E7A9 73 aa3.68□□□□□ -1.82
RGD2YFL047W YGL014C-AP0C5N1 53 aa3.66□□□□□ -1.82
RGD2YFL047W YOR394C-AQ8TGJ0 55 aa3.65□□□□□ -1.83
RGD2YFL047W QCR10P37299 77 aa3.63□□□□□ -1.83
RGD2YFL047W YBL044WP38194 122 aa3.63□□□□□ -1.83
RGD2YFL047W YJL009WP47078 108 aa3.56□□□□□ -1.84
RGD2YFL047W Q0017Q9ZZX8 53 aa3.55□□□□□ -1.84
RGD2YFL047W RPL37AP49166 88 aaKnown RBP3.52□□□□□ -1.85
RGD2YFL047W SOM1Q05676 74 aa3.5□□□□□ -1.85
RGD2YFL047W YML054C-AQ3E809 52 aa3.47□□□□□ -1.85
RGD2YFL047W YDR210WQ03482 75 aa3.38□□□□□ -1.87
RGD2YFL047W YOR072W-BQ3E832 53 aa3.35□□□□□ -1.87
RGD2YFL047W HHY1P39982 102 aa3.28□□□□□ -1.88
RGD2YFL047W YBR072C-AQ3E794 53 aa3.23□□□□□ -1.89
RGD2YFL047W YER078W-AQ3E7A2 54 aa2.8□□□□□ -1.96
RGD2YFL047W RPS29BP41058 56 aaKnown RBP2.71□□□□□ -1.98
RGD2YFL047W YER175W-AQ8TGU4 54 aa2.71□□□□□ -1.98
RGD2YFL047W YHR050W-AQ05451 56 aa2.68□□□□□ -1.98
RGD2YFL047W YOL164W-AQ3E7A5 60 aa2.62□□□□□ -1.99
RGD2YFL047W YAL067W-AQ8TGK6 75 aa2.56□□□□□ -2
RGD2YFL047W RPS29AP41057 56 aaKnown RBP2.54□□□□□ -2
RGD2YFL047W YHR032W-AP0C5N6 59 aa2.48□□□□□ -2.01
RGD2YFL047W YLR157W-EP0CF00 54 aa2.26□□□□□ -2.05
RGD2YFL047W YHR086W-AQ3E746 53 aa1.78□□□□□ -2.12
Retrieved 63 of 5,963 RNA–protein pairs in 25.5 ms