RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C YPR108W-AQ3E7B3 70 aa1.05□□□□□ -2.24
MSH4YFL003C YFL041W-AQ3E817 63 aa1.03□□□□□ -2.24
MSH4YFL003C YKL018C-AQ3E7A7 99 aa1.03□□□□□ -2.24
MSH4YFL003C SSS1P35179 80 aa1.02□□□□□ -2.25
MSH4YFL003C PAU7P39545 55 aa1.02□□□□□ -2.25
MSH4YFL003C ATP17Q06405 101 aa1□□□□□ -2.25
MSH4YFL003C YBR032WP38223 100 aa1□□□□□ -2.25
MSH4YFL003C ERI1P62651 68 aaKnown RBP1□□□□□ -2.25
MSH4YFL003C YIL134C-AQ45U18 67 aa0.98□□□□□ -2.25
MSH4YFL003C YFR009W-AP0C5M9 85 aa0.98□□□□□ -2.25
MSH4YFL003C YOL131WQ08270 108 aa0.98□□□□□ -2.25
MSH4YFL003C SPI1P40092 148 aa0.97□□□□□ -2.25
MSH4YFL003C YBR016WP38216 128 aa0.96□□□□□ -2.26
MSH4YFL003C YLR146W-AQ2V2P1 62 aa0.95□□□□□ -2.26
MSH4YFL003C EDC1P53080 175 aaPredicted RBP0.95□□□□□ -2.26
MSH4YFL003C RPS29BP41058 56 aaKnown RBP0.94□□□□□ -2.26
MSH4YFL003C YSY6P38374 65 aa0.93□□□□□ -2.26
MSH4YFL003C RPS29AP41057 56 aaKnown RBP0.93□□□□□ -2.26
MSH4YFL003C YDR246W-AQ3E763 66 aa0.92□□□□□ -2.26
MSH4YFL003C YIL102C-AQ2V2P5 75 aa0.91□□□□□ -2.26
MSH4YFL003C YDR034C-AP0C289 58 aa0.9□□□□□ -2.26
MSH4YFL003C HUB1Q6Q546 73 aa0.9□□□□□ -2.26
MSH4YFL003C YLL066W-BQ8TGJ7 56 aa0.9□□□□□ -2.27
MSH4YFL003C YPR010C-AA5Z2X5 72 aa0.89□□□□□ -2.27
MSH4YFL003C YBR200W-AQ3E755 54 aa0.88□□□□□ -2.27
MSH4YFL003C YBL039W-BP0C268 59 aa0.88□□□□□ -2.27
MSH4YFL003C RPS30AP0CX33 63 aaKnown RBP0.87□□□□□ -2.27
MSH4YFL003C RPS30BP0CX34 63 aaKnown RBP0.87□□□□□ -2.27
MSH4YFL003C TOM7P53507 60 aa0.87□□□□□ -2.27
MSH4YFL003C VMA9Q3E7B6 73 aa0.87□□□□□ -2.27
MSH4YFL003C COX9P07255 59 aa0.86□□□□□ -2.27
MSH4YFL003C SMX2P40204 77 aaKnown RBP0.86□□□□□ -2.27
MSH4YFL003C YDR182W-AQ3E796 67 aa0.86□□□□□ -2.27
MSH4YFL003C YOR011W-AQ3E807 68 aa0.85□□□□□ -2.27
MSH4YFL003C OLI1P61829 76 aa0.84□□□□□ -2.28
MSH4YFL003C YOR394C-AQ8TGJ0 55 aa0.84□□□□□ -2.28
MSH4YFL003C YGL258W-AQ3E740 77 aa0.83□□□□□ -2.28
MSH4YFL003C YBL044WP38194 122 aa0.83□□□□□ -2.28
MSH4YFL003C YOR192C-CQ3E736 78 aa0.82□□□□□ -2.28
MSH4YFL003C YGR025WP53216 100 aa0.82□□□□□ -2.28
MSH4YFL003C YOL166W-AQ8TGJ1 51 aa0.78□□□□□ -2.28
MSH4YFL003C YMR001C-AQ8TGS9 76 aa0.77□□□□□ -2.29
MSH4YFL003C YCR108CQ3E819 63 aa0.75□□□□□ -2.29
MSH4YFL003C YLR157W-DP0CE99 70 aa0.75□□□□□ -2.29
MSH4YFL003C Q0017Q9ZZX8 53 aa0.74□□□□□ -2.29
MSH4YFL003C PMP3P87284 55 aa0.72□□□□□ -2.29
MSH4YFL003C YLR342W-AQ3E810 57 aa0.7□□□□□ -2.3
MSH4YFL003C YKL023C-AQ2V2P3 75 aa0.69□□□□□ -2.3
MSH4YFL003C YOR008C-AQ3E7B9 74 aa0.68□□□□□ -2.3
MSH4YFL003C YBR230W-AQ3E762 66 aa0.68□□□□□ -2.3
MSH4YFL003C TOS6P48560 102 aa0.64□□□□□ -2.31
MSH4YFL003C COA2Q3E823 68 aa0.6□□□□□ -2.31
MSH4YFL003C YGR146C-AQ8TGT9 53 aa0.6□□□□□ -2.31
MSH4YFL003C RPL29P05747 59 aaPredicted RBP0.56□□□□□ -2.32
MSH4YFL003C DDR2P89113 61 aa0.56□□□□□ -2.32
MSH4YFL003C YHR073W-AP0C5N7 58 aa0.54□□□□□ -2.32
MSH4YFL003C YML054C-AQ3E809 52 aa0.52□□□□□ -2.33
MSH4YFL003C YLL006W-AQ3E814 58 aa0.51□□□□□ -2.33
MSH4YFL003C YJL127C-BQ3E828 52 aa0.46□□□□□ -2.34
MSH4YFL003C YOR072W-BQ3E832 53 aa0.42□□□□□ -2.34
MSH4YFL003C YJL133C-AQ3E7A3 74 aa0.38□□□□□ -2.35
MSH4YFL003C YOR316C-AQ3E806 69 aa0.36□□□□□ -2.35
MSH4YFL003C YHR050W-AQ05451 56 aa0.23□□□□□ -2.37
Retrieved 63 of 5,963 RNA–protein pairs in 106.9 ms