RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C VPS13Q07878 3144 aa0.18□□□□□ -2.38
SMB1YER029C THO2P53552 1597 aaKnown RBP0.18□□□□□ -2.38
SMB1YER029C ATG2P53855 1592 aa0.18□□□□□ -2.38
SMB1YER029C PDR12Q02785 1511 aa0.18□□□□□ -2.38
SMB1YER029C YLR157W-DP0CE99 70 aa0.17□□□□□ -2.38
SMB1YER029C TOR1P35169 2470 aa0.17□□□□□ -2.38
SMB1YER029C YOL131WQ08270 108 aa0.17□□□□□ -2.38
SMB1YER029C YDR182W-AQ3E796 67 aa0.17□□□□□ -2.38
SMB1YER029C YOR008C-AQ3E7B9 74 aa0.17□□□□□ -2.38
SMB1YER029C NUP170P38181 1502 aa0.17□□□□□ -2.38
SMB1YER029C GCN1P33892 2672 aaKnown RBP0.17□□□□□ -2.38
SMB1YER029C YMR001C-AQ8TGS9 76 aa0.16□□□□□ -2.38
SMB1YER029C DYN1P36022 4092 aa0.16□□□□□ -2.38
SMB1YER029C YPR117WQ06116 2489 aa0.15□□□□□ -2.38
SMB1YER029C FMP27Q06179 2628 aa0.15□□□□□ -2.39
SMB1YER029C YFR010W-AP0C5N0 62 aa0.15□□□□□ -2.39
SMB1YER029C MDN1Q12019 4910 aaKnown RBP0.15□□□□□ -2.39
SMB1YER029C STU1P38198 1513 aa0.14□□□□□ -2.39
SMB1YER029C TOS6P48560 102 aa0.14□□□□□ -2.39
SMB1YER029C YBR230W-AQ3E762 66 aa0.14□□□□□ -2.39
SMB1YER029C VMA9Q3E7B6 73 aa0.14□□□□□ -2.39
SMB1YER029C TOR2P32600 2474 aaKnown RBP0.14□□□□□ -2.39
SMB1YER029C SNQ2P32568 1501 aaKnown RBP0.13□□□□□ -2.39
SMB1YER029C RPS27BP38711 82 aa0.13□□□□□ -2.39
SMB1YER029C COA2Q3E823 68 aa0.13□□□□□ -2.39
SMB1YER029C YOL166W-AQ8TGJ1 51 aa0.13□□□□□ -2.39
SMB1YER029C RPS29AP41057 56 aaKnown RBP0.12□□□□□ -2.39
SMB1YER029C YKL023C-AQ2V2P3 75 aa0.12□□□□□ -2.39
SMB1YER029C YGR146C-AQ8TGT9 53 aa0.12□□□□□ -2.39
SMB1YER029C YGL258W-AQ3E740 77 aa0.11□□□□□ -2.39
SMB1YER029C YLL006W-AQ3E814 58 aa0.11□□□□□ -2.39
SMB1YER029C YOR072W-BQ3E832 53 aa0.11□□□□□ -2.39
SMB1YER029C FLO1P32768 1537 aa0.11□□□□□ -2.39
SMB1YER029C YBR056W-AI2HB52 66 aa0.1□□□□□ -2.39
SMB1YER029C YDR524C-BQ3E6R4 66 aa0.1□□□□□ -2.39
SMB1YER029C YOR192C-CQ3E736 78 aa0.1□□□□□ -2.39
SMB1YER029C MEC1P38111 2368 aa0.1□□□□□ -2.39
SMB1YER029C YPR010C-AA5Z2X5 72 aa0.08□□□□□ -2.4
SMB1YER029C YHR050W-AQ05451 56 aa0.05□□□□□ -2.4
SMB1YER029C YOR316C-AQ3E806 69 aa0.04□□□□□ -2.4
SMB1YER029C YJL133C-AQ3E7A3 74 aa0.02□□□□□ -2.41
SMB1YER029C COX9P07255 59 aa0.01□□□□□ -2.41
SMB1YER029C YDR034C-AP0C289 58 aa0.01□□□□□ -2.41
SMB1YER029C SMX2P40204 77 aaKnown RBP0.01□□□□□ -2.41
SMB1YER029C RPL29P05747 59 aaPredicted RBP0□□□□□ -2.41
SMB1YER029C DDR2P89113 61 aa0□□□□□ -2.41
SMB1YER029C YLR342W-AQ3E810 57 aa0□□□□□ -2.41
SMB1YER029C YIL046W-AQ3E7Z4 54 aa-0.01□□□□□ -2.41
SMB1YER029C YDR034W-BQ6Q5X2 51 aa-0.01□□□□□ -2.41
SMB1YER029C Q0017Q9ZZX8 53 aa-0.02□□□□□ -2.41
SMB1YER029C TOM7P53507 60 aa-0.03□□□□□ -2.41
SMB1YER029C YML054C-AQ3E809 52 aa-0.03□□□□□ -2.41
SMB1YER029C YHR073W-AP0C5N7 58 aa-0.05□□□□□ -2.42
SMB1YER029C YJL127C-BQ3E828 52 aa-0.05□□□□□ -2.42
SMB1YER029C RPL39P04650 51 aa-0.07□□□□□ -2.42
SMB1YER029C YLL066W-BQ8TGJ7 56 aa-0.07□□□□□ -2.42
SMB1YER029C YMR105W-AQ8TGS8 64 aa-0.07□□□□□ -2.42
SMB1YER029C PMP3P87284 55 aa-0.09□□□□□ -2.42
SMB1YER029C NCE101Q02820 53 aa-0.11□□□□□ -2.43
SMB1YER029C Q0297Q9ZZV8 51 aa-0.11□□□□□ -2.43
SMB1YER029C HOR7Q05827 59 aa-0.13□□□□□ -2.43
SMB1YER029C CUP1-1P0CX80 61 aa-0.14□□□□□ -2.43
SMB1YER029C CUP1-2P0CX81 61 aa-0.14□□□□□ -2.43
Retrieved 63 of 5,963 RNA–protein pairs in 20.4 ms