RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W RPL29P05747 59 aaPredicted RBP1.61□□□□□ -2.15
SWR1YDR334W YNL190WP53872 204 aa1.61□□□□□ -2.15
SWR1YDR334W TOM1Q03280 3268 aa1.61□□□□□ -2.15
SWR1YDR334W YNR077CP53758 84 aa1.61□□□□□ -2.15
SWR1YDR334W YDL012CQ12489 107 aa1.61□□□□□ -2.15
SWR1YDR334W TOS6P48560 102 aa1.61□□□□□ -2.15
SWR1YDR334W YGR121W-AQ3E816 71 aa1.6□□□□□ -2.15
SWR1YDR334W TRA1P38811 3744 aa1.6□□□□□ -2.15
SWR1YDR334W RPS30AP0CX33 63 aaKnown RBP1.59□□□□□ -2.16
SWR1YDR334W RPS30BP0CX34 63 aaKnown RBP1.59□□□□□ -2.16
SWR1YDR334W FAB1P34756 2278 aa1.58□□□□□ -2.16
SWR1YDR334W NOP10Q6Q547 58 aaPredicted RBP1.56□□□□□ -2.16
SWR1YDR334W RPS29AP41057 56 aaKnown RBP1.56□□□□□ -2.16
SWR1YDR334W GAT4P40569 121 aa1.55□□□□□ -2.16
SWR1YDR334W POL2P21951 2222 aaKnown RBP1.54□□□□□ -2.16
SWR1YDR334W YPR117WQ06116 2489 aa1.54□□□□□ -2.16
SWR1YDR334W NCE101Q02820 53 aa1.53□□□□□ -2.16
SWR1YDR334W AUA1P32450 94 aa1.52□□□□□ -2.17
SWR1YDR334W YER084WP40057 128 aa1.52□□□□□ -2.17
SWR1YDR334W TIM12P32830 109 aa1.52□□□□□ -2.17
SWR1YDR334W BRR2P32639 2163 aaKnown RBP1.51□□□□□ -2.17
SWR1YDR334W VPS13Q07878 3144 aa1.51□□□□□ -2.17
SWR1YDR334W YBR200W-AQ3E755 54 aa1.5□□□□□ -2.17
SWR1YDR334W YHR073W-AP0C5N7 58 aa1.5□□□□□ -2.17
SWR1YDR334W NUM1Q00402 2748 aa1.5□□□□□ -2.17
SWR1YDR334W YBR016WP38216 128 aa1.48□□□□□ -2.17
SWR1YDR334W CDC39P25655 2108 aaKnown RBP1.48□□□□□ -2.17
SWR1YDR334W YOR376W-AQ3E805 51 aa1.47□□□□□ -2.17
SWR1YDR334W BEM2P39960 2167 aaKnown RBP1.47□□□□□ -2.17
SWR1YDR334W YDL022C-AP0C5L6 82 aa1.47□□□□□ -2.17
SWR1YDR334W Q0297Q9ZZV8 51 aa1.46□□□□□ -2.18
SWR1YDR334W CSF1Q12150 2958 aa1.46□□□□□ -2.18
SWR1YDR334W YCR108CQ3E819 63 aa1.45□□□□□ -2.18
SWR1YDR334W HFA1P32874 2273 aa1.44□□□□□ -2.18
SWR1YDR334W HUA1P40325 198 aa1.44□□□□□ -2.18
SWR1YDR334W SEC16P48415 2195 aaKnown RBP1.42□□□□□ -2.18
SWR1YDR334W IRA1P18963 3092 aa1.42□□□□□ -2.18
SWR1YDR334W YHR212W-AP0CX91 67 aa1.41□□□□□ -2.18
SWR1YDR334W RPL39P04650 51 aa1.4□□□□□ -2.18
SWR1YDR334W RPL37BP51402 88 aaKnown RBP1.39□□□□□ -2.19
SWR1YDR334W SEN1Q00416 2231 aaKnown RBP1.39□□□□□ -2.19
SWR1YDR334W YHR086W-AQ3E746 53 aa1.37□□□□□ -2.19
SWR1YDR334W TOR2P32600 2474 aaKnown RBP1.36□□□□□ -2.19
SWR1YDR334W GCN1P33892 2672 aaKnown RBP1.36□□□□□ -2.19
SWR1YDR334W IRA2P19158 3079 aa1.36□□□□□ -2.19
SWR1YDR334W BPH1P25356 2167 aa1.34□□□□□ -2.19
SWR1YDR334W RDS3Q06835 107 aaPredicted RBP1.34□□□□□ -2.19
SWR1YDR334W FAS1P07149 2051 aaKnown RBP1.34□□□□□ -2.2
SWR1YDR334W TAO3P40468 2376 aa1.33□□□□□ -2.2
SWR1YDR334W PRP8P33334 2413 aaKnown RBP1.32□□□□□ -2.2
SWR1YDR334W RPL37AP49166 88 aaKnown RBP1.32□□□□□ -2.2
SWR1YDR334W RRT15Q3E811 62 aa1.32□□□□□ -2.2
SWR1YDR334W RPS27AP35997 82 aaKnown RBP1.31□□□□□ -2.2
SWR1YDR334W RPS27BP38711 82 aa1.31□□□□□ -2.2
SWR1YDR334W UTP20P35194 2493 aaKnown RBP1.31□□□□□ -2.2
SWR1YDR334W URA2P07259 2214 aaKnown RBP1.3□□□□□ -2.2
SWR1YDR334W FMP27Q06179 2628 aa1.28□□□□□ -2.2
SWR1YDR334W BLM10P43583 2143 aa1.26□□□□□ -2.21
SWR1YDR334W MEC1P38111 2368 aa1.25□□□□□ -2.21
SWR1YDR334W TOR1P35169 2470 aa1.24□□□□□ -2.21
SWR1YDR334W YLL066W-BQ8TGJ7 56 aa1.23□□□□□ -2.21
SWR1YDR334W YDR210WQ03482 75 aa1.22□□□□□ -2.21
SWR1YDR334W YOL166W-AQ8TGJ1 51 aa1.2□□□□□ -2.22
Retrieved 63 of 5,963 RNA–protein pairs in 5.6 ms