RNA–Protein interactions for RNA: YDR295C

HDA2, Transcript of Subunit of the HDA1 histone deacetylase complex, yeastyeast

Gene HDA2, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA2YDR295C RPS27BP38711 82 aa1.53□□□□□ -2.16
HDA2YDR295C GCN2P15442 1659 aa1.53□□□□□ -2.16
HDA2YDR295C SEN1Q00416 2231 aaKnown RBP1.53□□□□□ -2.17
HDA2YDR295C YBR016WP38216 128 aa1.52□□□□□ -2.17
HDA2YDR295C TOS6P48560 102 aa1.51□□□□□ -2.17
HDA2YDR295C SIP18P50263 79 aa1.51□□□□□ -2.17
HDA2YDR295C YBL044WP38194 122 aa1.5□□□□□ -2.17
HDA2YDR295C YCR108CQ3E819 63 aa1.5□□□□□ -2.17
HDA2YDR295C YGR146C-AQ8TGT9 53 aa1.45□□□□□ -2.18
HDA2YDR295C RPL37BP51402 88 aaKnown RBP1.44□□□□□ -2.18
HDA2YDR295C COA2Q3E823 68 aa1.41□□□□□ -2.18
HDA2YDR295C YLR342W-AQ3E810 57 aa1.4□□□□□ -2.19
HDA2YDR295C YOR008C-AQ3E7B9 74 aa1.38□□□□□ -2.19
HDA2YDR295C YJL133C-AQ3E7A3 74 aa1.37□□□□□ -2.19
HDA2YDR295C PRP8P33334 2413 aaKnown RBP1.35□□□□□ -2.19
HDA2YDR295C TAO3P40468 2376 aa1.32□□□□□ -2.2
HDA2YDR295C COX9P07255 59 aa1.32□□□□□ -2.2
HDA2YDR295C TOM7P53507 60 aa1.3□□□□□ -2.2
HDA2YDR295C RPS29BP41058 56 aaKnown RBP1.29□□□□□ -2.2
HDA2YDR295C YLL006W-AQ3E814 58 aa1.28□□□□□ -2.2
HDA2YDR295C DDR2P89113 61 aa1.28□□□□□ -2.2
HDA2YDR295C YGL258W-AQ3E740 77 aa1.24□□□□□ -2.21
HDA2YDR295C YOR072W-BQ3E832 53 aa1.24□□□□□ -2.21
HDA2YDR295C YOR316C-AQ3E806 69 aa1.23□□□□□ -2.21
HDA2YDR295C YDR524C-BQ3E6R4 66 aa1.22□□□□□ -2.21
HDA2YDR295C YJL127C-BQ3E828 52 aa1.18□□□□□ -2.22
HDA2YDR295C RPL29P05747 59 aaPredicted RBP1.16□□□□□ -2.22
HDA2YDR295C YBR056W-AI2HB52 66 aa1.16□□□□□ -2.22
HDA2YDR295C FLO1P32768 1537 aa1.13□□□□□ -2.23
HDA2YDR295C YDR034C-AP0C289 58 aa1.1□□□□□ -2.23
HDA2YDR295C YHR073W-AP0C5N7 58 aa1.06□□□□□ -2.24
HDA2YDR295C RPS29AP41057 56 aaKnown RBP1.05□□□□□ -2.24
HDA2YDR295C TOR1P35169 2470 aa1.02□□□□□ -2.25
HDA2YDR295C UTP20P35194 2493 aaKnown RBP1.01□□□□□ -2.25
HDA2YDR295C PMP3P87284 55 aa0.98□□□□□ -2.25
HDA2YDR295C HOR7Q05827 59 aa0.93□□□□□ -2.26
HDA2YDR295C NCE101Q02820 53 aa0.91□□□□□ -2.26
HDA2YDR295C MEC1P38111 2368 aa0.9□□□□□ -2.26
HDA2YDR295C YHR050W-AQ05451 56 aa0.88□□□□□ -2.27
HDA2YDR295C YML054C-AQ3E809 52 aa0.83□□□□□ -2.28
HDA2YDR295C Q0017Q9ZZX8 53 aa0.81□□□□□ -2.28
HDA2YDR295C TRA1P38811 3744 aa0.79□□□□□ -2.28
HDA2YDR295C TOR2P32600 2474 aaKnown RBP0.79□□□□□ -2.28
HDA2YDR295C CSF1Q12150 2958 aa0.74□□□□□ -2.29
HDA2YDR295C FMP27Q06179 2628 aa0.72□□□□□ -2.29
HDA2YDR295C YPR117WQ06116 2489 aa0.71□□□□□ -2.3
HDA2YDR295C GCN1P33892 2672 aaKnown RBP0.69□□□□□ -2.3
HDA2YDR295C DYN1P36022 4092 aa0.67□□□□□ -2.3
HDA2YDR295C YMR105W-AQ8TGS8 64 aa0.63□□□□□ -2.31
HDA2YDR295C IRA1P18963 3092 aa0.63□□□□□ -2.31
HDA2YDR295C YLL066W-BQ8TGJ7 56 aa0.58□□□□□ -2.32
HDA2YDR295C TEL1P38110 2787 aa0.57□□□□□ -2.32
HDA2YDR295C IRA2P19158 3079 aa0.56□□□□□ -2.32
HDA2YDR295C RPL39P04650 51 aa0.55□□□□□ -2.32
HDA2YDR295C VPS13Q07878 3144 aa0.52□□□□□ -2.33
HDA2YDR295C NUM1Q00402 2748 aa0.49□□□□□ -2.33
HDA2YDR295C CUP1-1P0CX80 61 aa0.35□□□□□ -2.35
HDA2YDR295C CUP1-2P0CX81 61 aa0.35□□□□□ -2.35
HDA2YDR295C YIL046W-AQ3E7Z4 54 aa0.26□□□□□ -2.37
HDA2YDR295C TOM1Q03280 3268 aa0.17□□□□□ -2.38
HDA2YDR295C MDN1Q12019 4910 aaKnown RBP0.13□□□□□ -2.39
HDA2YDR295C Q0297Q9ZZV8 51 aa-0.09□□□□□ -2.42
HDA2YDR295C YDR034W-BQ6Q5X2 51 aa-0.87□□□□□ -2.55
Retrieved 63 of 5,963 RNA–protein pairs in 71 ms