RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A YCL001W-BQ96VH2 84 aa-0.54□□□□□ -2.5
TFB5YDR079C-A MED11Q99278 115 aa-0.54□□□□□ -2.5
TFB5YDR079C-A NHP6AP11632 93 aaKnown RBP-0.55□□□□□ -2.5
TFB5YDR079C-A YBR292CP38357 123 aa-0.55□□□□□ -2.5
TFB5YDR079C-A SMD3P43321 101 aaKnown RBP-0.55□□□□□ -2.5
TFB5YDR079C-A YFL065CP43539 102 aa-0.55□□□□□ -2.5
TFB5YDR079C-A LSM8P47093 109 aaKnown RBP-0.55□□□□□ -2.5
TFB5YDR079C-A YPR203WQ08994 102 aa-0.55□□□□□ -2.5
TFB5YDR079C-A SMT3Q12306 101 aaKnown RBP-0.55□□□□□ -2.5
TFB5YDR079C-A TFB5Q3E7C1 72 aaPredicted RBP-0.55□□□□□ -2.5
TFB5YDR079C-A HUB1Q6Q546 73 aa-0.55□□□□□ -2.5
TFB5YDR079C-A YPR170W-BP0C5R9 85 aa-0.56□□□□□ -2.5
TFB5YDR079C-A YCR085WP25650 117 aa-0.56□□□□□ -2.5
TFB5YDR079C-A SOM1Q05676 74 aa-0.56□□□□□ -2.5
TFB5YDR079C-A SME1Q12330 94 aaPredicted RBP-0.56□□□□□ -2.5
TFB5YDR079C-A YLR146W-AQ2V2P1 62 aa-0.56□□□□□ -2.5
TFB5YDR079C-A YFL041W-AQ3E817 63 aa-0.56□□□□□ -2.5
TFB5YDR079C-A YNR034W-AQ3E841 98 aa-0.56□□□□□ -2.5
TFB5YDR079C-A SRB7P47822 140 aa-0.57□□□□□ -2.5
TFB5YDR079C-A YOR314WQ12506 109 aa-0.57□□□□□ -2.5
TFB5YDR079C-A YKL183C-AQ3E765 70 aa-0.57□□□□□ -2.5
TFB5YDR079C-A MRPL44P19956 98 aa-0.58□□□□□ -2.5
TFB5YDR079C-A TOM6P33448 61 aa-0.58□□□□□ -2.5
TFB5YDR079C-A COX19Q3E731 98 aa-0.58□□□□□ -2.5
TFB5YDR079C-A NOP10Q6Q547 58 aaPredicted RBP-0.58□□□□□ -2.5
TFB5YDR079C-A RBL2P48606 106 aaKnown RBP-0.59□□□□□ -2.5
TFB5YDR079C-A SAE3P89114 91 aa-0.59□□□□□ -2.5
TFB5YDR079C-A SUS1Q6WNK7 96 aa-0.59□□□□□ -2.5
TFB5YDR079C-A YOL166W-AQ8TGJ1 51 aa-0.59□□□□□ -2.5
TFB5YDR079C-A PBI2P0CT04 75 aaKnown RBP-0.6□□□□□ -2.51
TFB5YDR079C-A SSS1P35179 80 aa-0.6□□□□□ -2.51
TFB5YDR079C-A ATG8P38182 117 aaRIP-Chip data-0.6□□□□□ -2.51not detected
TFB5YDR079C-A IES5P40060 125 aa-0.6□□□□□ -2.51
TFB5YDR079C-A CNL1Q06333 122 aa-0.6□□□□□ -2.51
TFB5YDR079C-A ADF1Q2V2Q1 113 aa-0.6□□□□□ -2.51
TFB5YDR079C-A ELC1Q03071 99 aa-0.61□□□□□ -2.51
TFB5YDR079C-A YLR285C-AQ3E771 56 aa-0.61□□□□□ -2.51
TFB5YDR079C-A YGL014C-AP0C5N1 53 aa-0.62□□□□□ -2.51
TFB5YDR079C-A SRB6P32570 121 aa-0.62□□□□□ -2.51
TFB5YDR079C-A YSY6P38374 65 aa-0.62□□□□□ -2.51
TFB5YDR079C-A YNL277W-AQ3E7Z0 62 aa-0.62□□□□□ -2.51
TFB5YDR079C-A PAI3P01094 68 aa-0.63□□□□□ -2.51
TFB5YDR079C-A YLR363W-AQ3E747 85 aa-0.63□□□□□ -2.51
TFB5YDR079C-A YCR095W-AQ3E787 52 aa-0.63□□□□□ -2.51
TFB5YDR079C-A VMA10P48836 114 aaKnown RBP-0.65□□□□□ -2.51
TFB5YDR079C-A YPL038W-AQ3E7B4 63 aa-0.65□□□□□ -2.51
TFB5YDR079C-A SNN1P48232 102 aa-0.66□□□□□ -2.52
TFB5YDR079C-A ZEO1Q08245 113 aa-0.66□□□□□ -2.52
TFB5YDR079C-A YIL102C-AQ2V2P5 75 aa-0.66□□□□□ -2.52
TFB5YDR079C-A YIR021W-AQ3E739 70 aa-0.66□□□□□ -2.52
TFB5YDR079C-A VMA21P41806 77 aa-0.67□□□□□ -2.52
TFB5YDR079C-A SBH1P52870 82 aa-0.67□□□□□ -2.52
TFB5YDR079C-A SLO1Q3E784 85 aa-0.69□□□□□ -2.52
TFB5YDR079C-A VMA9Q3E7B6 73 aa-0.69□□□□□ -2.52
TFB5YDR079C-A YOR381W-AQ3E804 55 aa-0.69□□□□□ -2.52
TFB5YDR079C-A YDL085C-AQ3E7B7 68 aaKnown RBP-0.74□□□□□ -2.53
TFB5YDR079C-A LSO2Q3E772 92 aaKnown RBP-0.76□□□□□ -2.53
TFB5YDR079C-A YML100W-AQ8TGT0 57 aa-0.76□□□□□ -2.53
TFB5YDR079C-A YLR412C-AQ3E742 68 aa-0.81□□□□□ -2.54
TFB5YDR079C-A YOR376W-AQ3E805 51 aa-0.81□□□□□ -2.54
TFB5YDR079C-A TMA7Q3E764 64 aaKnown RBP-0.84□□□□□ -2.54
TFB5YDR079C-A YBR121C-AP0C5L4 52 aa-0.91□□□□□ -2.56
TFB5YDR079C-A YIL002W-AQ3E7Z5 69 aa-1.03□□□□□ -2.57
Retrieved 63 of 5,963 RNA–protein pairs in 48.3 ms