RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	YMR001C-A	Q8TGS9	76 aa		0.96	□□□□□ -2.26
RPN5	YDL147W	SGF11	Q03067	99 aa		0.95	□□□□□ -2.26
RPN5	YDL147W	SDH6	Q3E785	79 aa		0.95	□□□□□ -2.26
RPN5	YDL147W	YLR342W-A	Q3E810	57 aa		0.95	□□□□□ -2.26
RPN5	YDL147W	YLL006W-A	Q3E814	58 aa		0.95	□□□□□ -2.26
RPN5	YDL147W	YGL258W-A	Q3E740	77 aa		0.94	□□□□□ -2.26
RPN5	YDL147W	YOR008C-A	Q3E7B9	74 aa		0.94	□□□□□ -2.26
RPN5	YDL147W	TOM1	Q03280	3268 aa		0.94	□□□□□ -2.26
RPN5	YDL147W	RPS27A	P35997	82 aa	Known RBP	0.93	□□□□□ -2.26
RPN5	YDL147W	YBL039W-B	P0C268	59 aa		0.92	□□□□□ -2.26
RPN5	YDL147W	YBR200W-A	Q3E755	54 aa		0.92	□□□□□ -2.26
RPN5	YDL147W	HUB1	Q6Q546	73 aa		0.92	□□□□□ -2.26
RPN5	YDL147W	RPS27B	P38711	82 aa		0.91	□□□□□ -2.26
RPN5	YDL147W	YJL133C-A	Q3E7A3	74 aa		0.91	□□□□□ -2.26
RPN5	YDL147W	IRA2	P19158	3079 aa		0.91	□□□□□ -2.26
RPN5	YDL147W	SIP18	P50263	79 aa		0.9	□□□□□ -2.26
RPN5	YDL147W	NCE101	Q02820	53 aa		0.9	□□□□□ -2.26
RPN5	YDL147W	VPS13	Q07878	3144 aa		0.9	□□□□□ -2.26
RPN5	YDL147W	GCN1	P33892	2672 aa	Known RBP	0.9	□□□□□ -2.27
RPN5	YDL147W	YBR230W-A	Q3E762	66 aa		0.89	□□□□□ -2.27
RPN5	YDL147W	YOL097W-A	Q3E7Y9	61 aa		0.89	□□□□□ -2.27
RPN5	YDL147W	YOR011W-A	Q3E807	68 aa		0.88	□□□□□ -2.27
RPN5	YDL147W	YCR108C	Q3E819	63 aa		0.88	□□□□□ -2.27
RPN5	YDL147W	YOR394C-A	Q8TGJ0	55 aa		0.88	□□□□□ -2.27
RPN5	YDL147W	RPL29	P05747	59 aa	Predicted RBP	0.87	□□□□□ -2.27
RPN5	YDL147W	IRA1	P18963	3092 aa		0.86	□□□□□ -2.27
RPN5	YDL147W	YJL127C-B	Q3E828	52 aa		0.86	□□□□□ -2.27
RPN5	YDL147W	TRA1	P38811	3744 aa		0.86	□□□□□ -2.27
RPN5	YDL147W	UTP20	P35194	2493 aa	Known RBP	0.85	□□□□□ -2.27
RPN5	YDL147W	DDR2	P89113	61 aa		0.85	□□□□□ -2.27
RPN5	YDL147W	YIL046W-A	Q3E7Z4	54 aa		0.85	□□□□□ -2.27
RPN5	YDL147W	YMR105W-A	Q8TGS8	64 aa		0.85	□□□□□ -2.27
RPN5	YDL147W	CSF1	Q12150	2958 aa		0.83	□□□□□ -2.28
RPN5	YDL147W	MEC1	P38111	2368 aa		0.83	□□□□□ -2.28
RPN5	YDL147W	RPL39	P04650	51 aa		0.82	□□□□□ -2.28
RPN5	YDL147W	YGR146C-A	Q8TGT9	53 aa		0.82	□□□□□ -2.28
RPN5	YDL147W	YBL044W	P38194	122 aa		0.81	□□□□□ -2.28
RPN5	YDL147W	YPR117W	Q06116	2489 aa		0.8	□□□□□ -2.28
RPN5	YDL147W	YOR316C-A	Q3E806	69 aa		0.79	□□□□□ -2.28
RPN5	YDL147W	DYN1	P36022	4092 aa		0.79	□□□□□ -2.28
RPN5	YDL147W	TOR1	P35169	2470 aa		0.78	□□□□□ -2.28
RPN5	YDL147W	PMP3	P87284	55 aa		0.78	□□□□□ -2.28
RPN5	YDL147W	OLI1	P61829	76 aa		0.77	□□□□□ -2.29
RPN5	YDL147W	FMP27	Q06179	2628 aa		0.76	□□□□□ -2.29
RPN5	YDL147W	YHR073W-A	P0C5N7	58 aa		0.76	□□□□□ -2.29
RPN5	YDL147W	HOR7	Q05827	59 aa		0.76	□□□□□ -2.29
RPN5	YDL147W	NUM1	Q00402	2748 aa		0.75	□□□□□ -2.29
RPN5	YDL147W	YLL066W-B	Q8TGJ7	56 aa		0.74	□□□□□ -2.29
RPN5	YDL147W	TOR2	P32600	2474 aa	Known RBP	0.73	□□□□□ -2.29
RPN5	YDL147W	YDR034W-B	Q6Q5X2	51 aa		0.72	□□□□□ -2.29
RPN5	YDL147W	TEL1	P38110	2787 aa		0.72	□□□□□ -2.29
RPN5	YDL147W	CUP1-1	P0CX80	61 aa		0.7	□□□□□ -2.3
RPN5	YDL147W	CUP1-2	P0CX81	61 aa		0.7	□□□□□ -2.3
RPN5	YDL147W	YDR034C-A	P0C289	58 aa		0.67	□□□□□ -2.3
RPN5	YDL147W	YDR524C-B	Q3E6R4	66 aa		0.66	□□□□□ -2.3
RPN5	YDL147W	YOR072W-B	Q3E832	53 aa		0.64	□□□□□ -2.31
RPN5	YDL147W	YBR056W-A	I2HB52	66 aa		0.63	□□□□□ -2.31
RPN5	YDL147W	MDN1	Q12019	4910 aa	Known RBP	0.61	□□□□□ -2.31
RPN5	YDL147W	Q0297	Q9ZZV8	51 aa		0.58	□□□□□ -2.32
RPN5	YDL147W	RPS29A	P41057	56 aa	Known RBP	0.46	□□□□□ -2.34
RPN5	YDL147W	YHR050W-A	Q05451	56 aa		0.46	□□□□□ -2.34
RPN5	YDL147W	YML054C-A	Q3E809	52 aa		0.46	□□□□□ -2.34
RPN5	YDL147W	Q0017	Q9ZZX8	53 aa		0.46	□□□□□ -2.34

Retrieved 63 of 5,963 RNA–protein pairs in 41 ms