RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C OST5Q92316 86 aa1.33□□□□□ -2.2
BRE1YDL074C YGR164WP53291 111 aa1.33□□□□□ -2.2
BRE1YDL074C YMR001C-AQ8TGS9 76 aa1.33□□□□□ -2.2
BRE1YDL074C COX8P04039 78 aa1.32□□□□□ -2.2
BRE1YDL074C DDR48P18899 430 aaKnown RBP1.32□□□□□ -2.2
BRE1YDL074C YDL012CQ12489 107 aa1.32□□□□□ -2.2
BRE1YDL074C YFR032C-BQ8TGU2 87 aa1.32□□□□□ -2.2
BRE1YDL074C YLR412C-AQ3E742 68 aa1.31□□□□□ -2.2
BRE1YDL074C YOR381W-AQ3E804 55 aa1.31□□□□□ -2.2
BRE1YDL074C YGR146C-AQ8TGT9 53 aa1.31□□□□□ -2.2
BRE1YDL074C OLI1P61829 76 aa1.3□□□□□ -2.2
BRE1YDL074C YBR201C-AQ2V2Q3 67 aa1.3□□□□□ -2.2
BRE1YDL074C YOR316C-AQ3E806 69 aa1.3□□□□□ -2.2
BRE1YDL074C YBR121C-AP0C5L4 52 aa1.3□□□□□ -2.2
BRE1YDL074C YFL067WP43537 175 aa1.3□□□□□ -2.2
BRE1YDL074C YNL122CP53921 115 aaPredicted RBP1.3□□□□□ -2.2
BRE1YDL074C YDR010CQ12426 110 aa1.3□□□□□ -2.2
BRE1YDL074C YLR255CO13574 117 aa1.29□□□□□ -2.2
BRE1YDL074C YJR128WP47162 119 aa1.29□□□□□ -2.2
BRE1YDL074C MRX7P53869 86 aa1.29□□□□□ -2.2
BRE1YDL074C YMR122CQ03879 124 aa1.29□□□□□ -2.2
BRE1YDL074C CMC4Q3E7A9 73 aa1.29□□□□□ -2.2
BRE1YDL074C YIL156W-BQ2V2P4 73 aa1.28□□□□□ -2.2
BRE1YDL074C YCR095W-AQ3E787 52 aa1.28□□□□□ -2.2
BRE1YDL074C YBL008W-AQ3E821 79 aa1.28□□□□□ -2.2
BRE1YDL074C YER188C-AP0C0V2 99 aa1.27□□□□□ -2.21
BRE1YDL074C RPS28BP0C0X0 67 aaKnown RBP1.27□□□□□ -2.21
BRE1YDL074C RPS28AQ3E7X9 67 aaPredicted RBP1.27□□□□□ -2.21
BRE1YDL074C YGL034CP53186 121 aa1.26□□□□□ -2.21
BRE1YDL074C ATP17Q06405 101 aa1.26□□□□□ -2.21
BRE1YDL074C YBR016WP38216 128 aa1.25□□□□□ -2.21
BRE1YDL074C Q0017Q9ZZX8 53 aa1.25□□□□□ -2.21
BRE1YDL074C RPL37BP51402 88 aaKnown RBP1.24□□□□□ -2.21
BRE1YDL074C YNL277W-AQ3E7Z0 62 aa1.24□□□□□ -2.21
BRE1YDL074C YML054C-AQ3E809 52 aa1.23□□□□□ -2.21
BRE1YDL074C YJL144WP47009 104 aa1.22□□□□□ -2.21
BRE1YDL074C FYV12Q08559 129 aa1.22□□□□□ -2.21
BRE1YDL074C YOR394C-AQ8TGJ0 55 aa1.19□□□□□ -2.22
BRE1YDL074C QCR10P37299 77 aa1.19□□□□□ -2.22
BRE1YDL074C YEL014CP39999 101 aa1.19□□□□□ -2.22
BRE1YDL074C YJL009WP47078 108 aa1.17□□□□□ -2.22
BRE1YDL074C YBL044WP38194 122 aa1.16□□□□□ -2.22
BRE1YDL074C YML100W-AQ8TGT0 57 aa1.16□□□□□ -2.22
BRE1YDL074C YGL014C-AP0C5N1 53 aa1.15□□□□□ -2.23
BRE1YDL074C YOR072W-BQ3E832 53 aa1.15□□□□□ -2.23
BRE1YDL074C RPL37AP49166 88 aaKnown RBP1.13□□□□□ -2.23
BRE1YDL074C YCR108CQ3E819 63 aa1.13□□□□□ -2.23
BRE1YDL074C MDN1Q12019 4910 aaKnown RBP1.13□□□□□ -2.23
BRE1YDL074C YDR210WQ03482 75 aa1.13□□□□□ -2.23
BRE1YDL074C SOM1Q05676 74 aa1.12□□□□□ -2.23
BRE1YDL074C YOR376W-AQ3E805 51 aa1.11□□□□□ -2.23
BRE1YDL074C YBR072C-AQ3E794 53 aa1.1□□□□□ -2.23
BRE1YDL074C HHY1P39982 102 aa1.08□□□□□ -2.24
BRE1YDL074C RPS29BP41058 56 aaKnown RBP1□□□□□ -2.25
BRE1YDL074C RPS29AP41057 56 aaKnown RBP0.95□□□□□ -2.26
BRE1YDL074C YHR050W-AQ05451 56 aa0.95□□□□□ -2.26
BRE1YDL074C YAL067W-AQ8TGK6 75 aa0.88□□□□□ -2.27
BRE1YDL074C YER078W-AQ3E7A2 54 aa0.85□□□□□ -2.27
BRE1YDL074C YOL164W-AQ3E7A5 60 aa0.82□□□□□ -2.28
BRE1YDL074C YLR157W-EP0CF00 54 aa0.79□□□□□ -2.28
BRE1YDL074C YHR032W-AP0C5N6 59 aa0.77□□□□□ -2.29
BRE1YDL074C YER175W-AQ8TGU4 54 aa0.65□□□□□ -2.3
BRE1YDL074C YHR086W-AQ3E746 53 aa0.59□□□□□ -2.32
Retrieved 63 of 5,963 RNA–protein pairs in 4.7 ms