RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W MOT1P32333 1867 aa1.27□□□□□ -2.21
USO1YDL058W Q0017Q9ZZX8 53 aa1.27□□□□□ -2.21
USO1YDL058W YDR034W-BQ6Q5X2 51 aa1.27□□□□□ -2.21
USO1YDL058W ECM29P38737 1868 aa1.26□□□□□ -2.21
USO1YDL058W FAB1P34756 2278 aa1.26□□□□□ -2.21
USO1YDL058W BEM2P39960 2167 aaKnown RBP1.24□□□□□ -2.21
USO1YDL058W YLR157W-EP0CF00 54 aa1.24□□□□□ -2.21
USO1YDL058W YHR050W-AQ05451 56 aa1.24□□□□□ -2.21
USO1YDL058W RPL39P04650 51 aa1.24□□□□□ -2.21
USO1YDL058W YDR210WQ03482 75 aa1.23□□□□□ -2.21
USO1YDL058W RPL37BP51402 88 aaKnown RBP1.23□□□□□ -2.21
USO1YDL058W GIS2P53849 153 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
USO1YDL058W FAS1P07149 2051 aaKnown RBP1.21□□□□□ -2.22
USO1YDL058W CDC39P25655 2108 aaKnown RBP1.21□□□□□ -2.22
USO1YDL058W CUP1-1P0CX80 61 aa1.21□□□□□ -2.22
USO1YDL058W CUP1-2P0CX81 61 aa1.21□□□□□ -2.22
USO1YDL058W YCR108CQ3E819 63 aa1.21□□□□□ -2.22
USO1YDL058W YHR086W-AQ3E746 53 aa1.2□□□□□ -2.22
USO1YDL058W UBR1P19812 1950 aa1.2□□□□□ -2.22
USO1YDL058W MYO1P08964 1928 aa1.2□□□□□ -2.22
USO1YDL058W RPS29BP41058 56 aaKnown RBP1.2□□□□□ -2.22
USO1YDL058W YLR422WQ06409 1932 aa1.19□□□□□ -2.22
USO1YDL058W RPL37AP49166 88 aaKnown RBP1.19□□□□□ -2.22
USO1YDL058W RPS27AP35997 82 aaKnown RBP1.18□□□□□ -2.22
USO1YDL058W RPS27BP38711 82 aa1.18□□□□□ -2.22
USO1YDL058W HFA1P32874 2273 aa1.18□□□□□ -2.22
USO1YDL058W YBR016WP38216 128 aa1.16□□□□□ -2.22
USO1YDL058W CCH1P50077 2039 aa1.15□□□□□ -2.23
USO1YDL058W PRP8P33334 2413 aaKnown RBP1.12□□□□□ -2.23
USO1YDL058W RPS29AP41057 56 aaKnown RBP1.11□□□□□ -2.23
USO1YDL058W BRR2P32639 2163 aaKnown RBP1.1□□□□□ -2.23
USO1YDL058W DYN1P36022 4092 aa1.1□□□□□ -2.23
USO1YDL058W YIL046W-AQ3E7Z4 54 aa1.08□□□□□ -2.24
USO1YDL058W SLH1P53327 1967 aaKnown RBP1.08□□□□□ -2.24
USO1YDL058W URA2P07259 2214 aaKnown RBP1.08□□□□□ -2.24
USO1YDL058W LAA1P39526 2014 aa1.08□□□□□ -2.24
USO1YDL058W BPH1P25356 2167 aa1.06□□□□□ -2.24
USO1YDL058W TOM1Q03280 3268 aa1.05□□□□□ -2.24
USO1YDL058W Q0297Q9ZZV8 51 aa1.04□□□□□ -2.24
USO1YDL058W TAO3P40468 2376 aa1.03□□□□□ -2.24
USO1YDL058W POL2P21951 2222 aaKnown RBP1.02□□□□□ -2.25
USO1YDL058W STT4P37297 1900 aa1.02□□□□□ -2.25
USO1YDL058W CYR1P08678 2026 aaKnown RBP1□□□□□ -2.25
USO1YDL058W YLL066W-BQ8TGJ7 56 aa1□□□□□ -2.25
USO1YDL058W SEN1Q00416 2231 aaKnown RBP0.99□□□□□ -2.25
USO1YDL058W BLM10P43583 2143 aa0.98□□□□□ -2.25
USO1YDL058W YBR056W-AI2HB52 66 aa0.98□□□□□ -2.25
USO1YDL058W TEL1P38110 2787 aa0.98□□□□□ -2.25
USO1YDL058W NUM1Q00402 2748 aa0.97□□□□□ -2.25
USO1YDL058W MDN1Q12019 4910 aaKnown RBP0.96□□□□□ -2.26
USO1YDL058W VPS13Q07878 3144 aa0.95□□□□□ -2.26
USO1YDL058W YPR117WQ06116 2489 aa0.92□□□□□ -2.26
USO1YDL058W SEC16P48415 2195 aaKnown RBP0.92□□□□□ -2.26
USO1YDL058W TRA1P38811 3744 aa0.9□□□□□ -2.27
USO1YDL058W IRA1P18963 3092 aa0.87□□□□□ -2.27
USO1YDL058W IRA2P19158 3079 aa0.86□□□□□ -2.27
USO1YDL058W GCN1P33892 2672 aaKnown RBP0.83□□□□□ -2.28
USO1YDL058W UTP20P35194 2493 aaKnown RBP0.82□□□□□ -2.28
USO1YDL058W CSF1Q12150 2958 aa0.81□□□□□ -2.28
USO1YDL058W TOR1P35169 2470 aa0.81□□□□□ -2.28
USO1YDL058W FMP27Q06179 2628 aa0.78□□□□□ -2.28
USO1YDL058W MEC1P38111 2368 aa0.74□□□□□ -2.29
USO1YDL058W TOR2P32600 2474 aaKnown RBP0.73□□□□□ -2.29
Retrieved 63 of 5,963 RNA–protein pairs in 12.3 ms