RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W YHR212W-AP0CX91 67 aa1.42□□□□□ -2.18
MCD1YDL003W YBL044WP38194 122 aa1.42□□□□□ -2.18
MCD1YDL003W YLR255CO13574 117 aa1.41□□□□□ -2.18
MCD1YDL003W YDR115WQ04598 105 aa1.41□□□□□ -2.18
MCD1YDL003W YOR394C-AQ8TGJ0 55 aa1.41□□□□□ -2.18
MCD1YDL003W YHR073W-AP0C5N7 58 aa1.4□□□□□ -2.19
MCD1YDL003W CMC4Q3E7A9 73 aa1.4□□□□□ -2.19
MCD1YDL003W COX7P10174 60 aa1.39□□□□□ -2.19
MCD1YDL003W RPL37BP51402 88 aaKnown RBP1.39□□□□□ -2.19
MCD1YDL003W YDR210WQ03482 75 aa1.39□□□□□ -2.19
MCD1YDL003W YOR316C-AQ3E806 69 aa1.39□□□□□ -2.19
MCD1YDL003W URA2P07259 2214 aaKnown RBP1.38□□□□□ -2.19
MCD1YDL003W YJR085CP47131 105 aaKnown RBP1.37□□□□□ -2.19
MCD1YDL003W YCL042WP25572 119 aa1.37□□□□□ -2.19
MCD1YDL003W YLL066W-BQ8TGJ7 56 aa1.37□□□□□ -2.19
MCD1YDL003W YDR034C-AP0C289 58 aa1.36□□□□□ -2.19
MCD1YDL003W YCR108CQ3E819 63 aa1.36□□□□□ -2.19
MCD1YDL003W Q0297Q9ZZV8 51 aa1.35□□□□□ -2.19
MCD1YDL003W HFA1P32874 2273 aa1.35□□□□□ -2.19
MCD1YDL003W RPL43AP0CX25 92 aaKnown RBP1.35□□□□□ -2.19
MCD1YDL003W RPL43BP0CX26 92 aa1.35□□□□□ -2.19
MCD1YDL003W LCL1Q02786 101 aa1.35□□□□□ -2.19
MCD1YDL003W YPR195CQ06594 109 aa1.35□□□□□ -2.19
MCD1YDL003W YBR016WP38216 128 aa1.34□□□□□ -2.2
MCD1YDL003W YHR032W-AP0C5N6 59 aa1.33□□□□□ -2.2
MCD1YDL003W YJL144WP47009 104 aa1.32□□□□□ -2.2
MCD1YDL003W YBR072C-AQ3E794 53 aa1.32□□□□□ -2.2
MCD1YDL003W YJL009WP47078 108 aa1.31□□□□□ -2.2
MCD1YDL003W YOR072W-BQ3E832 53 aa1.31□□□□□ -2.2
MCD1YDL003W HHY1P39982 102 aa1.29□□□□□ -2.2
MCD1YDL003W YDR034W-BQ6Q5X2 51 aa1.29□□□□□ -2.2
MCD1YDL003W YAL067W-AQ8TGK6 75 aa1.28□□□□□ -2.2
MCD1YDL003W RPL37AP49166 88 aaKnown RBP1.26□□□□□ -2.21
MCD1YDL003W TAO3P40468 2376 aa1.26□□□□□ -2.21
MCD1YDL003W YML054C-AQ3E809 52 aa1.23□□□□□ -2.21
MCD1YDL003W MEC1P38111 2368 aa1.19□□□□□ -2.22
MCD1YDL003W Q0017Q9ZZX8 53 aa1.18□□□□□ -2.22
MCD1YDL003W YBR056W-AI2HB52 66 aa1.17□□□□□ -2.22
MCD1YDL003W IRA2P19158 3079 aa1.17□□□□□ -2.22
MCD1YDL003W PRP8P33334 2413 aaKnown RBP1.16□□□□□ -2.22
MCD1YDL003W YOL164W-AQ3E7A5 60 aa1.13□□□□□ -2.23
MCD1YDL003W FMP27Q06179 2628 aa1.12□□□□□ -2.23
MCD1YDL003W UTP20P35194 2493 aaKnown RBP1.11□□□□□ -2.23
MCD1YDL003W GCN1P33892 2672 aaKnown RBP1.1□□□□□ -2.23
MCD1YDL003W CSF1Q12150 2958 aa1.09□□□□□ -2.24
MCD1YDL003W VPS13Q07878 3144 aa1.08□□□□□ -2.24
MCD1YDL003W YPR117WQ06116 2489 aa1.07□□□□□ -2.24
MCD1YDL003W TOM1Q03280 3268 aa1.05□□□□□ -2.24
MCD1YDL003W YHR050W-AQ05451 56 aa1.04□□□□□ -2.24
MCD1YDL003W IRA1P18963 3092 aa1.04□□□□□ -2.24
MCD1YDL003W YHR086W-AQ3E746 53 aa1.01□□□□□ -2.25
MCD1YDL003W YLR157W-EP0CF00 54 aa1□□□□□ -2.25
MCD1YDL003W TOR2P32600 2474 aaKnown RBP1□□□□□ -2.25
MCD1YDL003W TOR1P35169 2470 aa0.97□□□□□ -2.25
MCD1YDL003W TRA1P38811 3744 aa0.97□□□□□ -2.25
MCD1YDL003W RPS29AP41057 56 aaKnown RBP0.96□□□□□ -2.26
MCD1YDL003W CUP1-1P0CX80 61 aa0.95□□□□□ -2.26
MCD1YDL003W CUP1-2P0CX81 61 aa0.95□□□□□ -2.26
MCD1YDL003W TEL1P38110 2787 aa0.91□□□□□ -2.26
MCD1YDL003W RPS29BP41058 56 aaKnown RBP0.89□□□□□ -2.27
MCD1YDL003W NUM1Q00402 2748 aa0.88□□□□□ -2.27
MCD1YDL003W DYN1P36022 4092 aa0.85□□□□□ -2.27
MCD1YDL003W MDN1Q12019 4910 aaKnown RBP0.67□□□□□ -2.3
Retrieved 63 of 5,963 RNA–protein pairs in 9.5 ms