RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W YFR032C-BQ8TGU2 87 aa4.72□□□□□ -1.65
TOD6YBL054W ATP17Q06405 101 aa4.7□□□□□ -1.66
TOD6YBL054W YOL097W-AQ3E7Y9 61 aa4.7□□□□□ -1.66
TOD6YBL054W YNL122CP53921 115 aaPredicted RBP4.68□□□□□ -1.66
TOD6YBL054W LCL2Q08045 131 aa4.66□□□□□ -1.66
TOD6YBL054W SPG1P50088 95 aa4.65□□□□□ -1.66
TOD6YBL054W YGL149WP53116 101 aa4.65□□□□□ -1.66
TOD6YBL054W YJR128WP47162 119 aa4.65□□□□□ -1.67
TOD6YBL054W YDR034C-AP0C289 58 aa4.64□□□□□ -1.67
TOD6YBL054W MRP10O75012 95 aa4.63□□□□□ -1.67
TOD6YBL054W YJR085CP47131 105 aaKnown RBP4.62□□□□□ -1.67
TOD6YBL054W YLR122CQ12312 125 aa4.62□□□□□ -1.67
TOD6YBL054W YBR201C-AQ2V2Q3 67 aa4.6□□□□□ -1.67
TOD6YBL054W YGR146C-AQ8TGT9 53 aa4.6□□□□□ -1.67
TOD6YBL054W YLR255CO13574 117 aa4.59□□□□□ -1.67
TOD6YBL054W MRX7P53869 86 aa4.59□□□□□ -1.67
TOD6YBL054W TOR1P35169 2470 aa4.57□□□□□ -1.68
TOD6YBL054W YHR073W-AP0C5N7 58 aa4.57□□□□□ -1.68
TOD6YBL054W YCL042WP25572 119 aa4.56□□□□□ -1.68
TOD6YBL054W YPR195CQ06594 109 aa4.56□□□□□ -1.68
TOD6YBL054W YBL008W-AQ3E821 79 aa4.56□□□□□ -1.68
TOD6YBL054W COX8P04039 78 aa4.55□□□□□ -1.68
TOD6YBL054W YOR316C-AQ3E806 69 aa4.53□□□□□ -1.68
TOD6YBL054W DDR48P18899 430 aaKnown RBP4.53□□□□□ -1.69
TOD6YBL054W NUM1Q00402 2748 aa4.51□□□□□ -1.69
TOD6YBL054W QCR10P37299 77 aa4.49□□□□□ -1.69
TOD6YBL054W FYV12Q08559 129 aa4.48□□□□□ -1.69
TOD6YBL054W OLI1P61829 76 aa4.47□□□□□ -1.69
TOD6YBL054W YGL014C-AP0C5N1 53 aa4.46□□□□□ -1.7
TOD6YBL054W LCL1Q02786 101 aa4.43□□□□□ -1.7
TOD6YBL054W YBR016WP38216 128 aa4.41□□□□□ -1.7
TOD6YBL054W RPL37BP51402 88 aaKnown RBP4.41□□□□□ -1.7
TOD6YBL054W YJL144WP47009 104 aa4.37□□□□□ -1.71
TOD6YBL054W YEL014CP39999 101 aa4.35□□□□□ -1.71
TOD6YBL054W SOM1Q05676 74 aa4.35□□□□□ -1.71
TOD6YBL054W CUP1-1P0CX80 61 aa4.3□□□□□ -1.72
TOD6YBL054W CUP1-2P0CX81 61 aa4.3□□□□□ -1.72
TOD6YBL054W COX7P10174 60 aa4.29□□□□□ -1.72
TOD6YBL054W DYN1P36022 4092 aa4.29□□□□□ -1.72
TOD6YBL054W YCR108CQ3E819 63 aa4.27□□□□□ -1.73
TOD6YBL054W YBL044WP38194 122 aa4.25□□□□□ -1.73
TOD6YBL054W YOR394C-AQ8TGJ0 55 aa4.24□□□□□ -1.73
TOD6YBL054W YDR210WQ03482 75 aa4.14□□□□□ -1.75
TOD6YBL054W YFL067WP43537 175 aa4.1□□□□□ -1.75
TOD6YBL054W YER175W-AQ8TGU4 54 aa4.08□□□□□ -1.76
TOD6YBL054W RPL37AP49166 88 aaKnown RBP4.01□□□□□ -1.77
TOD6YBL054W YOR072W-BQ3E832 53 aa3.92□□□□□ -1.78
TOD6YBL054W CMC4Q3E7A9 73 aa3.88□□□□□ -1.79
TOD6YBL054W HHY1P39982 102 aa3.87□□□□□ -1.79
TOD6YBL054W YBR072C-AQ3E794 53 aa3.87□□□□□ -1.79
TOD6YBL054W YER078W-AQ3E7A2 54 aa3.84□□□□□ -1.8
TOD6YBL054W YML054C-AQ3E809 52 aa3.83□□□□□ -1.8
TOD6YBL054W YJL009WP47078 108 aa3.81□□□□□ -1.8
TOD6YBL054W Q0017Q9ZZX8 53 aa3.8□□□□□ -1.8
TOD6YBL054W YHR032W-AP0C5N6 59 aa3.5□□□□□ -1.85
TOD6YBL054W MDN1Q12019 4910 aaKnown RBP3.5□□□□□ -1.85
TOD6YBL054W YOL164W-AQ3E7A5 60 aa3.24□□□□□ -1.89
TOD6YBL054W YAL067W-AQ8TGK6 75 aa3.16□□□□□ -1.9
TOD6YBL054W YHR050W-AQ05451 56 aa3.11□□□□□ -1.91
TOD6YBL054W RPS29BP41058 56 aaKnown RBP2.78□□□□□ -1.96
TOD6YBL054W RPS29AP41057 56 aaKnown RBP2.76□□□□□ -1.97
TOD6YBL054W YLR157W-EP0CF00 54 aa2.72□□□□□ -1.97
TOD6YBL054W YHR086W-AQ3E746 53 aa2.54□□□□□ -2
Retrieved 63 of 5,963 RNA–protein pairs in 52.5 ms