RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 IGFBP6P24592 240 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-229ENST00000641891 STX2P32856 288 aa17.69■□□□□ 0.42
PHGDH-229ENST00000641891 ACTN3Q08043 901 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-229ENST00000641891 BST2Q10589 180 aaKnown RBP17.69■□□□□ 0.42
PHGDH-229ENST00000641891 PPP6R3Q5H9R7 873 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-229ENST00000641891 IGDCC3Q8IVU1 814 aa17.69■□□□□ 0.42
PHGDH-229ENST00000641891 C4orf33Q8N1A6 199 aa17.69■□□□□ 0.42
PHGDH-229ENST00000641891 SLC2A14Q8TDB8 520 aa17.69■□□□□ 0.42
PHGDH-229ENST00000641891 NSRP1Q9H0G5 558 aaKnown RBP17.69■□□□□ 0.42
PHGDH-229ENST00000641891 TRABDQ9H4I3 376 aa17.69■□□□□ 0.42
PHGDH-229ENST00000641891 IPPQ9Y573 584 aa17.69■□□□□ 0.42
PHGDH-229ENST00000641891 A0A1W2PPM1 405 aa17.68■□□□□ 0.42
PHGDH-229ENST00000641891 E7ESA3 106 aa17.68■□□□□ 0.42
PHGDH-229ENST00000641891 APOL1O14791 398 aa17.68■□□□□ 0.42
PHGDH-229ENST00000641891 KRT15P19012 456 aa17.68■□□□□ 0.42
PHGDH-229ENST00000641891 TKTP29401 623 aaKnown RBP17.68■□□□□ 0.42
PHGDH-229ENST00000641891 AXLP30530 894 aa17.68■□□□□ 0.42
PHGDH-229ENST00000641891 WDR4P57081 412 aaKnown RBP17.68■□□□□ 0.42
PHGDH-229ENST00000641891 PDK2Q15119 407 aa17.68■□□□□ 0.42
PHGDH-229ENST00000641891 BOLA3Q53S33 107 aa17.68■□□□□ 0.42
PHGDH-229ENST00000641891 NUGGCQ68CJ6 796 aa17.68■□□□□ 0.42
PHGDH-229ENST00000641891 ANKRD52Q8NB46 1076 aa17.68■□□□□ 0.42
PHGDH-229ENST00000641891 SMG8Q8ND04 991 aaKnown RBP17.68■□□□□ 0.42
PHGDH-229ENST00000641891 TEKT4Q8WW24 435 aa17.68■□□□□ 0.42
PHGDH-229ENST00000641891 TGS1Q96RS0 853 aaKnown RBP17.68■□□□□ 0.42
PHGDH-229ENST00000641891 SNX25Q9H3E2 840 aa17.68■□□□□ 0.42
PHGDH-229ENST00000641891 USP29Q9HBJ7 922 aa17.68■□□□□ 0.42
PHGDH-229ENST00000641891 CACNG4Q9UBN1 327 aa17.68■□□□□ 0.42
PHGDH-229ENST00000641891 CHMP2BQ9UQN3 213 aa17.68■□□□□ 0.42
PHGDH-229ENST00000641891 FAM47DPA6NHR8 397 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 KCNN4O15554 427 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 SNX3O60493 162 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 CD4P01730 458 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 FOXN2P32314 431 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 BCAT1P54687 386 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 PCBP1Q15365 356 aaKnown RBP eCLIP17.67■□□□□ 0.422e-6■■■□□ 14.6
PHGDH-229ENST00000641891 EFHC2Q5JST6 749 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 FAXCQ5TGI0 409 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 ARHGEF18Q6ZSZ5 1173 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 C3orf62Q6ZUJ4 267 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 OSTM1Q86WC4 334 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 MAP7D3Q8IWC1 876 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 CCDC33Q8N5R6 958 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 ATP11CQ8NB49 1132 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 FBF1Q8TES7 1133 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 STK32AQ8WU08 396 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 NDRG1Q92597 394 aaKnown RBP17.67■□□□□ 0.42
PHGDH-229ENST00000641891 ZNF560Q96MR9 790 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 PAIP2Q9BPZ3 127 aaKnown RBP17.67■□□□□ 0.42
PHGDH-229ENST00000641891 C17orf102A2RUQ5 167 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 CCT8L1PA6NM43 557 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 OAS1P00973 400 aaKnown RBP17.67■□□□□ 0.42
PHGDH-229ENST00000641891 KCNE1P15382 129 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 RBL1P28749 1068 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 CPT1AP50416 773 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 BCAR1P56945 870 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 HUNKP57058 714 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 RNASELQ05823 741 aaKnown RBP17.67■□□□□ 0.42
PHGDH-229ENST00000641891 ITIH4Q14624 930 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 TAF1CQ15572 869 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-229ENST00000641891 XKR4Q5GH76 650 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 CRYBG2Q8N1P7 616 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 ANKS4BQ8N8V4 417 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 APPL2Q8NEU8 664 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 GDAP2Q9NXN4 497 aa17.67■□□□□ 0.42
PHGDH-229ENST00000641891 PSMC3IPQ9P2W1 217 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-229ENST00000641891 MYADML2A6NDP7 307 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 AVILO75366 819 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 STIP1P31948 543 aaKnown RBP17.66■□□□□ 0.42
PHGDH-229ENST00000641891 TAF6P49848 677 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 GEMIN4P57678 1058 aaKnown RBP17.66■□□□□ 0.42
PHGDH-229ENST00000641891 KCNJ11Q14654 390 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 SLC9A4Q6AI14 798 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 ADGRF2Q8IZF7 708 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 PDIK1LQ8N165 341 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 USP6NLQ92738 828 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 C11orf84Q9BUA3 381 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-229ENST00000641891 AP5M1Q9H0R1 490 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 GGT7Q9UJ14 662 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 MEIS3P2A8K0S8 358 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 MDM4O15151 490 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 ACAT1P24752 427 aaKnown RBP17.66■□□□□ 0.42
PHGDH-229ENST00000641891 CYP2F1P24903 491 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 RDXP35241 583 aaKnown RBP17.66■□□□□ 0.42
PHGDH-229ENST00000641891 ELK3P41970 407 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 CRYBB1P53674 252 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-229ENST00000641891 NR1H3Q13133 447 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 CGB2Q6NT52 195 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 SLC26A9Q7LBE3 791 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 ZDHHC17Q8IUH5 632 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 PALM2Q8IXS6 379 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 AGGF1Q8N302 714 aaeCLIP17.66■□□□□ 0.42
PHGDH-229ENST00000641891 CCDC185Q8N715 623 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 FAF2Q96CS3 445 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 MAGEB18Q96M61 343 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 ZFP42Q96MM3 310 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 PHACTR1Q9C0D0 580 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 DHX35Q9H5Z1 703 aaKnown RBP17.66■□□□□ 0.42
PHGDH-229ENST00000641891 RAB6BQ9NRW1 208 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 SLC24A2Q9UI40 661 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms