RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 ROR1Q01973 937 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 GPR17Q13304 367 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 ADAM15Q13444 863 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 MAMLD1Q13495 774 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 SOWAHAQ2M3V2 549 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 FAM153CQ494X1 144 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 SPDYCQ5MJ68 293 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 WSCD1Q658N2 575 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 SCARA3Q6AZY7 606 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 LILRA6Q6PI73 481 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 PRSS55Q6UWB4 352 aaPredicted RBP10.78□□□□□ -0.68
PHGDH-224ENST00000641711 CCDC149Q6ZUS6 474 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 ADGRD2Q7Z7M1 963 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 PRELID2Q8N945 189 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 CMASQ8NFW8 434 aaPredicted RBP10.78□□□□□ -0.68
PHGDH-224ENST00000641711 ZNF461Q8TAF7 563 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 SPPL2BQ8TCT7 592 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 SLC22A17Q8WUG5 538 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 KBTBD7Q8WVZ9 684 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 AUTS2Q8WXX7 1259 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 IFT81Q8WYA0 676 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 FUBP3Q96I24 572 aaKnown RBP eCLIP10.78□□□□□ -0.68
PHGDH-224ENST00000641711 BTBD6Q96KE9 485 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 PKNOX2Q96KN3 472 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 TNIP3Q96KP6 325 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 CEP295NLQ96MC4 621 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 GDAP1L1Q96MZ0 367 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 HINFPQ9BQA5 517 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 SFXN1Q9H9B4 322 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 ZDHHC7Q9NXF8 308 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.78□□□□□ -0.68
PHGDH-224ENST00000641711 CHORDC1Q9UHD1 332 aaPredicted RBP10.78□□□□□ -0.68
PHGDH-224ENST00000641711 FAM153AQ9UHL3 310 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 ADAM21Q9UKJ8 722 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 UTP11Q9Y3A2 253 aaKnown RBP10.78□□□□□ -0.68
PHGDH-224ENST00000641711 CDY1Q9Y6F8 540 aa10.78□□□□□ -0.68
PHGDH-224ENST00000641711 TCRBV5S1A1TA0A578 114 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 GOLGA8KD6RF30 607 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 TTI1O43156 1089 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 PSTPIP1O43586 416 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 HSF2BPO75031 334 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 RNF40O75150 1001 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 CALB1P05937 261 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 CFHP08603 1231 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 PAEPP09466 180 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 HNRNPA1P09651 372 aaKnown RBP eCLIP10.77□□□□□ -0.69
PHGDH-224ENST00000641711 CPB1P15086 417 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 ATF2P15336 505 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 IGFBP6P24592 240 aaPredicted RBP10.77□□□□□ -0.69
PHGDH-224ENST00000641711 OR1D2P34982 312 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 FNTAP49354 379 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 DR1Q01658 176 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 PLD1Q13393 1074 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 SIX1Q15475 284 aaPredicted RBP10.77□□□□□ -0.69
PHGDH-224ENST00000641711 TRADDQ15628 312 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 INTS6LQ5JSJ4 861 aaKnown RBP10.77□□□□□ -0.69
PHGDH-224ENST00000641711 DUPD1Q68J44 220 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 LRIG3Q6UXM1 1119 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 C4orf50Q6ZRC1 276 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 TCEAL8Q8IYN2 117 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 ZDHHC14Q8IZN3 488 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 MICALL1Q8N3F8 863 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 GOLGA6L1Q8N7Z2 621 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 TMEM35BQ8NCS4 154 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.77□□□□□ -0.69
PHGDH-224ENST00000641711 FEZF2Q8TBJ5 459 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 MAIP1Q8WWC4 291 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 SLCO2A1Q92959 643 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 LRRC45Q96CN5 670 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 B3GALT6Q96L58 329 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 C11orf70Q9BRQ4 267 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 ERP44Q9BS26 406 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 FAM129AQ9BZQ8 928 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 ZCWPW1Q9H0M4 648 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 LHX5Q9H2C1 402 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 SNX25Q9H3E2 840 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 LRRC19Q9H756 370 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 PARVAQ9NVD7 372 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 DDX43Q9NXZ2 648 aaKnown RBP10.77□□□□□ -0.69
PHGDH-224ENST00000641711 VPS18Q9P253 973 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 NXF1Q9UBU9 619 aaKnown RBP10.77□□□□□ -0.69
PHGDH-224ENST00000641711 RASAL2Q9UJF2 1139 aa10.77□□□□□ -0.69
PHGDH-224ENST00000641711 BARX2Q9UMQ3 279 aaPredicted RBP10.77□□□□□ -0.69
PHGDH-224ENST00000641711 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.77□□□□□ -0.69
PHGDH-224ENST00000641711 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-224ENST00000641711 WDR27A2RRH5 827 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 TGM5O43548 720 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 CILPO75339 1184 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 GLP2RO95838 553 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 ELF1P32519 619 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 GNL1P36915 607 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-224ENST00000641711 HLTFQ14527 1009 aaKnown RBP eCLIP10.76□□□□□ -0.69
PHGDH-224ENST00000641711 AAK1Q2M2I8 961 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 PUS10Q3MIT2 529 aaKnown RBP10.76□□□□□ -0.69
PHGDH-224ENST00000641711 CFAP58Q5T655 872 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 MMS22LQ6ZRQ5 1243 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 CPNE8Q86YQ8 564 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 JAMLQ86YT9 394 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 TMEM130Q8N3G9 435 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 KREMEN2Q8NCW0 462 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms