RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 STAP2Q9UGK3 403 aa4.31□□□□□ -1.72
AP3S1-209ENST00000640413 CDKN1CP49918 316 aaPredicted RBP4.3□□□□□ -1.72
AP3S1-209ENST00000640413 BCAT1P54687 386 aa4.3□□□□□ -1.72
AP3S1-209ENST00000640413 HSF1Q00613 529 aa4.3□□□□□ -1.72
AP3S1-209ENST00000640413 MFSD13AQ14CX5 517 aa4.3□□□□□ -1.72
AP3S1-209ENST00000640413 ASIC2Q16515 512 aa4.3□□□□□ -1.72
AP3S1-209ENST00000640413 PRTGQ2VWP7 1150 aa4.3□□□□□ -1.72
AP3S1-209ENST00000640413 DGKKQ5KSL6 1271 aa4.3□□□□□ -1.72
AP3S1-209ENST00000640413 UBE2Q1Q7Z7E8 422 aa4.3□□□□□ -1.72
AP3S1-209ENST00000640413 SPARTQ8N0X7 666 aa4.3□□□□□ -1.72
AP3S1-209ENST00000640413 DNAJB14Q8TBM8 379 aa4.3□□□□□ -1.72
AP3S1-209ENST00000640413 TMEM204Q9BSN7 226 aa4.3□□□□□ -1.72
AP3S1-209ENST00000640413 TMEM8AQ9HCN3 771 aa4.3□□□□□ -1.72
AP3S1-209ENST00000640413 GAR1Q9NY12 217 aaKnown RBP4.3□□□□□ -1.72
AP3S1-209ENST00000640413 MAFFQ9ULX9 164 aa4.3□□□□□ -1.72
AP3S1-209ENST00000640413 USP22Q9UPT9 525 aa4.3□□□□□ -1.72
AP3S1-209ENST00000640413 A0A087WWL8 130 aa4.29□□□□□ -1.72
AP3S1-209ENST00000640413 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.29□□□□□ -1.72
AP3S1-209ENST00000640413 TMEM233B4DJY2 109 aa4.29□□□□□ -1.72
AP3S1-209ENST00000640413 M0R3H8 397 aa4.29□□□□□ -1.72
AP3S1-209ENST00000640413 ALDH2P05091 517 aa4.29□□□□□ -1.72
AP3S1-209ENST00000640413 CDK11BP21127 795 aaKnown RBP4.29□□□□□ -1.72
AP3S1-209ENST00000640413 TACR3P29371 465 aa4.29□□□□□ -1.72
AP3S1-209ENST00000640413 RECQLP46063 649 aaPredicted RBP4.29□□□□□ -1.72
AP3S1-209ENST00000640413 B4GALNT1Q00973 533 aa4.29□□□□□ -1.72
AP3S1-209ENST00000640413 CFHR3Q02985 330 aa4.29□□□□□ -1.72
AP3S1-209ENST00000640413 CTBP1Q13363 440 aa4.29□□□□□ -1.72
AP3S1-209ENST00000640413 MTFMTQ96DP5 389 aaKnown RBP4.29□□□□□ -1.72
AP3S1-209ENST00000640413 MVB12AQ96EY5 273 aa4.29□□□□□ -1.72
AP3S1-209ENST00000640413 CNNM1Q9NRU3 951 aa4.29□□□□□ -1.72
AP3S1-209ENST00000640413 IL33O95760 270 aa4.28□□□□□ -1.72
AP3S1-209ENST00000640413 SYF2O95926 243 aaKnown RBP4.28□□□□□ -1.72
AP3S1-209ENST00000640413 CDC25AP30304 524 aa4.28□□□□□ -1.72
AP3S1-209ENST00000640413 PRKAR1BP31321 381 aa4.28□□□□□ -1.72
AP3S1-209ENST00000640413 EVA1CP58658 441 aa4.28□□□□□ -1.72
AP3S1-209ENST00000640413 KRTAP10-5P60370 271 aa4.28□□□□□ -1.72
AP3S1-209ENST00000640413 INPP5JQ15735 1006 aaPredicted RBP4.28□□□□□ -1.72
AP3S1-209ENST00000640413 EARS2Q5JPH6 523 aaKnown RBP4.28□□□□□ -1.72
AP3S1-209ENST00000640413 TMEM63BQ5T3F8 832 aa4.28□□□□□ -1.72
AP3S1-209ENST00000640413 DCAF12L1Q5VU92 463 aa4.28□□□□□ -1.72
AP3S1-209ENST00000640413 LMBRD2Q68DH5 695 aaPredicted RBP4.28□□□□□ -1.72
AP3S1-209ENST00000640413 ZNF324BQ6AW86 544 aaPredicted RBP4.28□□□□□ -1.72
AP3S1-209ENST00000640413 B4GALNT4Q76KP1 1039 aa4.28□□□□□ -1.72
AP3S1-209ENST00000640413 MPP5Q8N3R9 675 aa4.28□□□□□ -1.72
AP3S1-209ENST00000640413 WDYHV1Q96HA8 205 aa4.28□□□□□ -1.72
AP3S1-209ENST00000640413 ZBTB45Q96K62 511 aaPredicted RBP4.28□□□□□ -1.72
AP3S1-209ENST00000640413 CGRRF1Q99675 332 aa4.28□□□□□ -1.72
AP3S1-209ENST00000640413 SMAD5Q99717 465 aaKnown RBP4.28□□□□□ -1.72
AP3S1-209ENST00000640413 TMEM45AQ9NWC5 275 aa4.28□□□□□ -1.72
AP3S1-209ENST00000640413 ZSCAN32Q9NX65 697 aa4.28□□□□□ -1.72
AP3S1-209ENST00000640413 ASAP1Q9ULH1 1129 aa4.28□□□□□ -1.72
AP3S1-209ENST00000640413 COG5Q9UP83 839 aa4.28□□□□□ -1.72
AP3S1-209ENST00000640413 C2CD4BA6NLJ0 364 aa4.27□□□□□ -1.73
AP3S1-209ENST00000640413 FYB1O15117 783 aa4.27□□□□□ -1.73
AP3S1-209ENST00000640413 INPPL1O15357 1258 aa4.27□□□□□ -1.73
AP3S1-209ENST00000640413 TMPRSS11DO60235 418 aa4.27□□□□□ -1.73
AP3S1-209ENST00000640413 SRGAP2O75044 1071 aa4.27□□□□□ -1.73
AP3S1-209ENST00000640413 NDUFB8O95169 186 aa4.27□□□□□ -1.73
AP3S1-209ENST00000640413 UQCRC1P31930 480 aa4.27□□□□□ -1.73
AP3S1-209ENST00000640413 IL6STP40189 918 aaPredicted RBP4.27□□□□□ -1.73
AP3S1-209ENST00000640413 TIRAPP58753 221 aa4.27□□□□□ -1.73
AP3S1-209ENST00000640413 PFKFB3Q16875 520 aaPredicted RBP4.27□□□□□ -1.73
AP3S1-209ENST00000640413 DNASE2BQ8WZ79 361 aa4.27□□□□□ -1.73
AP3S1-209ENST00000640413 EDC3Q96F86 508 aaKnown RBP4.27□□□□□ -1.73
AP3S1-209ENST00000640413 TRMT61AQ96FX7 289 aaKnown RBP4.27□□□□□ -1.73
AP3S1-209ENST00000640413 KAZALD1Q96I82 304 aa4.27□□□□□ -1.73
AP3S1-209ENST00000640413 TM2D2Q9BX73 214 aa4.27□□□□□ -1.73
AP3S1-209ENST00000640413 VN1R3Q9BXE9 311 aa4.27□□□□□ -1.73
AP3S1-209ENST00000640413 PIH1D1Q9NWS0 290 aaKnown RBP4.27□□□□□ -1.73
AP3S1-209ENST00000640413 STXBP5LQ9Y2K9 1186 aa4.27□□□□□ -1.73
AP3S1-209ENST00000640413 SBNO2Q9Y2G9 1366 aa4.27□□□□□ -1.73
AP3S1-209ENST00000640413 ZNF814B7Z6K7 855 aa4.26□□□□□ -1.73
AP3S1-209ENST00000640413 BTN3A1O00481 513 aa4.26□□□□□ -1.73
AP3S1-209ENST00000640413 CTIFO43310 598 aaKnown RBP4.26□□□□□ -1.73
AP3S1-209ENST00000640413 SNUPNO95149 360 aaKnown RBP4.26□□□□□ -1.73
AP3S1-209ENST00000640413 EPN2O95208 641 aa4.26□□□□□ -1.73
AP3S1-209ENST00000640413 EPHA3P29320 983 aa4.26□□□□□ -1.73
AP3S1-209ENST00000640413 MTHFSP49914 203 aa4.26□□□□□ -1.73
AP3S1-209ENST00000640413 DEUP1Q05D60 604 aa4.26□□□□□ -1.73
AP3S1-209ENST00000640413 PPATQ06203 517 aa4.26□□□□□ -1.73
AP3S1-209ENST00000640413 KPNB1Q14974 876 aaKnown RBP4.26□□□□□ -1.73
AP3S1-209ENST00000640413 FAM110CQ1W6H9 321 aa4.26□□□□□ -1.73
AP3S1-209ENST00000640413 C12orf76Q8N812 135 aaPredicted RBP4.26□□□□□ -1.73
AP3S1-209ENST00000640413 FAM84BQ96KN1 310 aaPredicted RBP4.26□□□□□ -1.73
AP3S1-209ENST00000640413 MLXIPLQ9NP71 852 aa4.26□□□□□ -1.73
AP3S1-209ENST00000640413 SIRT4Q9Y6E7 314 aaPredicted RBP4.26□□□□□ -1.73
AP3S1-209ENST00000640413 TMEM272A0A1B0GTI8 110 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 FOXN3O00409 490 aaPredicted RBP4.25□□□□□ -1.73
AP3S1-209ENST00000640413 RRHO14718 337 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 PLAUP00749 431 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 CD63P08962 238 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 ARRB2P32121 409 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 MCM5P33992 734 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 FGL2Q14314 439 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 ODF3L2Q3SX64 289 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 CAPRIN2Q6IMN6 1127 aaKnown RBP4.25□□□□□ -1.73
AP3S1-209ENST00000640413 ZDHHC24Q6UX98 284 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 ZNF783Q6ZMS7 281 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 RFX8Q6ZV50 586 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 KCTD20Q7Z5Y7 419 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms