RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 CAMK1DQ8IU85 385 aa5.94□□□□□ -1.46
SCN1A-216ENST00000637968 PLPP6Q8IY26 295 aa5.94□□□□□ -1.46
SCN1A-216ENST00000637968 POC5Q8NA72 575 aa5.94□□□□□ -1.46
SCN1A-216ENST00000637968 GSTCDQ8NEC7 633 aa5.94□□□□□ -1.46
SCN1A-216ENST00000637968 JPH3Q8WXH2 748 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-216ENST00000637968 ISOC1Q96CN7 298 aa5.94□□□□□ -1.46
SCN1A-216ENST00000637968 CSRNP1Q96S65 589 aa5.94□□□□□ -1.46
SCN1A-216ENST00000637968 PSD2Q9BQI7 771 aa5.94□□□□□ -1.46
SCN1A-216ENST00000637968 TMEM246Q9BRR3 403 aa5.94□□□□□ -1.46
SCN1A-216ENST00000637968 KIFC3Q9BVG8 833 aa5.94□□□□□ -1.46
SCN1A-216ENST00000637968 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-216ENST00000637968 DCLK3Q9C098 648 aa5.94□□□□□ -1.46
SCN1A-216ENST00000637968 ADAM7Q9H2U9 754 aa5.94□□□□□ -1.46
SCN1A-216ENST00000637968 TRIM45Q9H8W5 580 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-216ENST00000637968 SLC38A7Q9NVC3 462 aa5.94□□□□□ -1.46
SCN1A-216ENST00000637968 MOCS1Q9NZB8 636 aa5.94□□□□□ -1.46
SCN1A-216ENST00000637968 NAALADL1Q9UQQ1 740 aa5.94□□□□□ -1.46
SCN1A-216ENST00000637968 RGS5O15539 181 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 GGPS1O95749 300 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 MT-ND3P03897 115 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 GAP43P17677 238 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 CTNNA2P26232 953 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 POLD2P49005 469 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 DRG2P55039 364 aaKnown RBP5.93□□□□□ -1.46
SCN1A-216ENST00000637968 MGAT5Q09328 741 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 NFIL3Q16649 462 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 RBM20Q5T481 1227 aaKnown RBP5.93□□□□□ -1.46
SCN1A-216ENST00000637968 AGAP7PQ5VUJ5 663 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 DHRS4L2Q6PKH6 230 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 CYP20A1Q6UW02 462 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 OR8K3Q8NH51 312 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 HM13Q8TCT9 377 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 HTRA1Q92743 480 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 MIPEPQ99797 713 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 TMEM245Q9H330 911 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 DNAJC18Q9H819 358 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 EMILIN3Q9NT22 766 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 ARMCX1Q9P291 453 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 XPO7Q9UIA9 1087 aaKnown RBP5.93□□□□□ -1.46
SCN1A-216ENST00000637968 PSMD13Q9UNM6 376 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 PCDHB4Q9Y5E5 795 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 PCDHGA8Q9Y5G5 932 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 TAF6LQ9Y6J9 622 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 EMSYQ7Z589 1322 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 FLT4P35916 1363 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 ERVV-2B6SEH9 535 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 TRIM49P0CI25 452 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 TRIM49CP0CI26 452 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 MYBP10242 640 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 RARBP10826 455 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 PON1P27169 355 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 NUDT1P36639 197 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 PLIN5Q00G26 463 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 RRP1BQ14684 758 aaKnown RBP5.93□□□□□ -1.46
SCN1A-216ENST00000637968 TTC38Q5R3I4 469 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 NDUFAF5Q5TEU4 345 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 ARL6IP4Q66PJ3 421 aaKnown RBP5.93□□□□□ -1.46
SCN1A-216ENST00000637968 PGM2L1Q6PCE3 622 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 SYCE2Q6PIF2 218 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 OTOAQ7RTW8 1153 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 ARMC8Q8IUR7 673 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 DTX3Q8N9I9 347 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 FLAD1Q8NFF5 587 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 ZNF420Q8TAQ5 688 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-216ENST00000637968 NCKIPSDQ9NZQ3 722 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 ACTR3BQ9P1U1 418 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 FAM8A1Q9UBU6 413 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 AP3M1Q9Y2T2 418 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 SNX5Q9Y5X3 404 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 SESN1Q9Y6P5 492 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 ZNF536O15090 1300 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 A0A1W2PP64 1363 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 FOXN3O00409 490 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-216ENST00000637968 CLOCKO15516 846 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 PHGDHO43175 533 aaKnown RBP5.93□□□□□ -1.46
SCN1A-216ENST00000637968 SNAP91O60641 907 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 NPPAP01160 153 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 IFIT1P09914 478 aaKnown RBP5.93□□□□□ -1.46
SCN1A-216ENST00000637968 PRKCAP17252 672 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 HAAOP46952 286 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 RAB14P61106 215 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 PRKCEQ02156 737 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 DUPD1Q68J44 220 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 ALKBH2Q6NS38 261 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 ZNF544Q6NX49 715 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 RSBN1LQ6PCB5 846 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-216ENST00000637968 VSTM1Q6UX27 236 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 USP37Q86T82 979 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 RBM15BQ8NDT2 890 aaKnown RBP5.93□□□□□ -1.46
SCN1A-216ENST00000637968 ADAMTS16Q8TE57 1224 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 ALKBH8Q96BT7 664 aaKnown RBP5.93□□□□□ -1.46
SCN1A-216ENST00000637968 CMTM5Q96DZ9 223 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 CALML4Q96GE6 196 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 OSBPL11Q9BXB4 747 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 FAM96AQ9H5X1 160 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 SLA2Q9H6Q3 261 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 POLR1BQ9H9Y6 1135 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 PPCSQ9HAB8 311 aa5.93□□□□□ -1.46
SCN1A-216ENST00000637968 AGO2Q9UKV8 859 aaKnown RBP5.93□□□□□ -1.46
SCN1A-216ENST00000637968 PCDHA12Q9UN75 941 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms