RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 STN1Q9H668 368 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 C10orf88Q9H8K7 445 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 ANKEF1Q9NU02 776 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 CNTN6Q9UQ52 1028 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 MEI4A8MW99 385 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 BIRC5O15392 142 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 OR6B1O95007 311 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 SERPINB6P35237 376 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 COPAP53621 1224 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 STX3Q13277 289 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 ACBD5Q5T8D3 534 aaPredicted RBP16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 SPOPLQ6IQ16 392 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 RNF111Q6ZNA4 994 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 SH3BP5LQ7L8J4 393 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 ARCQ7LC44 396 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 PPM1NQ8N819 430 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 CHURC1Q8WUH1 139 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 PLEKHG4BQ96PX9 1271 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 THAP1Q9NVV9 213 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 FAM198AQ9UFP1 575 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 ASTN2O75129 1339 aaPredicted RBP16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 CCDC195A0A1B0GUA6 201 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 C3orf70A6NLC5 250 aaPredicted RBP16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 G3V3G9 751 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 CASQ2O14958 399 aaPredicted RBP16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 CLPTM1O96005 669 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 KRT7P08729 469 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 CLCN2P51788 898 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 OGDHQ02218 1023 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 FOLH1Q04609 750 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 CCNIQ14094 377 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 DPYSL3Q14195 570 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 PSMD6Q15008 389 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 DCAF8Q5TAQ9 597 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 TRMT1LQ7Z2T5 733 aaKnown RBP16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 FAM84AQ96KN4 292 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 RNF181Q9P0P0 153 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 ZNF232Q9UNY5 417 aa16.17■□□□□ 0.18
CACNA1A-235ENST00000637004 EXTL3O43909 919 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 PGM3O95394 542 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 LSM8O95777 96 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 C4BPAP04003 597 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 SCNN1BP51168 640 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 EPHB1P54762 984 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 HPCAP84074 193 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 TDRD10Q5VZ19 366 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 LMBRD2Q68DH5 695 aaPredicted RBP16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 PGM2L1Q6PCE3 622 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 ANO5Q75V66 913 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 UNC45BQ8IWX7 931 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 THNSL1Q8IYQ7 743 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 FAM71DQ8N9W8 422 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 ZNF606Q8WXB4 792 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 MAML3Q96JK9 1138 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 ZFRQ96KR1 1074 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 SLC13A1Q9BZW2 595 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 AGO4Q9HCK5 861 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 TBC1D22BQ9NU19 505 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 HSFX1Q9UBD0 423 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 ITGA11Q9UKX5 1188 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 TCRBV5S1A1TA0A578 114 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 RAD17O75943 681 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 MRPS5P82675 430 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 C1orf228Q6PIY5 440 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 RBM44Q6ZP01 1051 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 ALDH16A1Q8IZ83 802 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 CCDC33Q8N5R6 958 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 ACTRT2Q8TDY3 377 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 NLRP4Q96MN2 994 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 ZNF395Q9H8N7 513 aaPredicted RBP16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 TIMMDC1Q9NPL8 285 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 TCEAL9Q9UHQ7 104 aa16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 APOBEC2Q9Y235 224 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-235ENST00000637004 VILLO15195 856 aa16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 NPM3O75607 178 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 KRT38O76015 456 aa16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 BPGMP07738 259 aa16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 ABCD1P33897 745 aa16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 CYLC2Q14093 348 aaPredicted RBP16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 HADHQ16836 314 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 GRAMD1BQ3KR37 738 aa16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 MARVELD2Q8N4S9 558 aa16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 SAMD3Q8N6K7 520 aa16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 PPP1R14BQ96C90 147 aa16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 EBF4Q9BQW3 602 aa16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 TTLL13PA6NNM8 815 aa16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 MCF2LO15068 1137 aa16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 DENRO43583 198 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 SMIM18P0DKX4 95 aa16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 RAG1P15918 1043 aa16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 EIF3EP60228 445 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 BTKQ06187 659 aa16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 DBN1Q16643 649 aa16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 RABGAP1LQ5R372 815 aa16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 TMEM35BQ8NCS4 154 aa16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 PPP1R14CQ8TAE6 165 aa16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 FRMD8Q9BZ67 464 aaPredicted RBP16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 APOBEC3GQ9HC16 384 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-235ENST00000637004 XAB2Q9HCS7 855 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms