RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 CCSER2Q9H7U1 834 aa19.28■□□□□ 0.68
CLN6-210ENST00000635747 KIAA1257Q9ULG3 409 aa19.28■□□□□ 0.68
CLN6-210ENST00000635747 CTNND2Q9UQB3 1225 aa19.28■□□□□ 0.68
CLN6-210ENST00000635747 SH3BP1Q9Y3L3 701 aa19.28■□□□□ 0.68
CLN6-210ENST00000635747 FANCMQ8IYD8 2048 aa19.27■□□□□ 0.68
CLN6-210ENST00000635747 CHURC1-FNTBB4DL54 471 aa19.27■□□□□ 0.68
CLN6-210ENST00000635747 ADH1CP00326 375 aa19.27■□□□□ 0.68
CLN6-210ENST00000635747 EGFP01133 1207 aa19.27■□□□□ 0.68
CLN6-210ENST00000635747 ATP5C1P36542 298 aaKnown RBP19.27■□□□□ 0.68
CLN6-210ENST00000635747 ANP32AP39687 249 aaKnown RBP19.27■□□□□ 0.68
CLN6-210ENST00000635747 DHCR24Q15392 516 aa19.27■□□□□ 0.68
CLN6-210ENST00000635747 LONP2Q86WA8 852 aa19.27■□□□□ 0.68
CLN6-210ENST00000635747 ZFRQ96KR1 1074 aaKnown RBP19.27■□□□□ 0.68
CLN6-210ENST00000635747 CDK5RAP1Q96SZ6 601 aaKnown RBP19.27■□□□□ 0.68
CLN6-210ENST00000635747 ARID3AQ99856 593 aa19.27■□□□□ 0.68
CLN6-210ENST00000635747 HINFPQ9BQA5 517 aa19.27■□□□□ 0.68
CLN6-210ENST00000635747 CYLDQ9NQC7 956 aa19.27■□□□□ 0.68
CLN6-210ENST00000635747 KIAA1468Q9P260 1216 aa19.27■□□□□ 0.68
CLN6-210ENST00000635747 K7ESF4 209 aa19.26■□□□□ 0.67
CLN6-210ENST00000635747 EIF2DP41214 584 aaKnown RBP19.26■□□□□ 0.67
CLN6-210ENST00000635747 MARSP56192 900 aaKnown RBP19.26■□□□□ 0.67
CLN6-210ENST00000635747 KLHDC10Q6PID8 442 aa19.26■□□□□ 0.67
CLN6-210ENST00000635747 GPRIN1Q7Z2K8 1008 aa19.26■□□□□ 0.67
CLN6-210ENST00000635747 CCDC186Q7Z3E2 898 aa19.26■□□□□ 0.67
CLN6-210ENST00000635747 ZNF276Q8N554 614 aa19.26■□□□□ 0.67
CLN6-210ENST00000635747 ANKRD52Q8NB46 1076 aa19.26■□□□□ 0.67
CLN6-210ENST00000635747 JAKMIP2Q96AA8 810 aa19.26■□□□□ 0.67
CLN6-210ENST00000635747 NT5C1BQ96P26 610 aa19.26■□□□□ 0.67
CLN6-210ENST00000635747 FBRSL1Q9HCM7 1045 aaKnown RBP19.26■□□□□ 0.67
CLN6-210ENST00000635747 RAB23Q9ULC3 237 aa19.26■□□□□ 0.67
CLN6-210ENST00000635747 SLC8A2Q9UPR5 921 aa19.26■□□□□ 0.67
CLN6-210ENST00000635747 USP3Q9Y6I4 520 aa19.26■□□□□ 0.67
CLN6-210ENST00000635747 CCDC163A0A0D9SF12 145 aa19.25■□□□□ 0.67
CLN6-210ENST00000635747 CYP26A1O43174 497 aa19.25■□□□□ 0.67
CLN6-210ENST00000635747 RNF40O75150 1001 aa19.25■□□□□ 0.67
CLN6-210ENST00000635747 CYP17A1P05093 508 aa19.25■□□□□ 0.67
CLN6-210ENST00000635747 CCDC192P0DO97 292 aa19.25■□□□□ 0.67
CLN6-210ENST00000635747 RALAP11233 206 aa19.25■□□□□ 0.67
CLN6-210ENST00000635747 PREPLQ4J6C6 727 aaPredicted RBP19.25■□□□□ 0.67
CLN6-210ENST00000635747 SGO2Q562F6 1265 aa19.25■□□□□ 0.67
CLN6-210ENST00000635747 ARHGAP18Q8N392 663 aa19.25■□□□□ 0.67
CLN6-210ENST00000635747 CAMKK1Q8N5S9 505 aa19.25■□□□□ 0.67
CLN6-210ENST00000635747 ACDQ96AP0 544 aa19.25■□□□□ 0.67
CLN6-210ENST00000635747 SRRTQ9BXP5 876 aaKnown RBP19.25■□□□□ 0.67
CLN6-210ENST00000635747 NCDNQ9UBB6 729 aa19.25■□□□□ 0.67
CLN6-210ENST00000635747 HESX1Q9UBX0 185 aa19.25■□□□□ 0.67
CLN6-210ENST00000635747 DNMT3LQ9UJW3 386 aa19.25■□□□□ 0.67
CLN6-210ENST00000635747 LSM7Q9UK45 103 aaKnown RBP19.25■□□□□ 0.67
CLN6-210ENST00000635747 SMG5Q9UPR3 1016 aaKnown RBP19.25■□□□□ 0.67
CLN6-210ENST00000635747 HELZP42694 1942 aaKnown RBP19.24■□□□□ 0.67
CLN6-210ENST00000635747 VDRP11473 427 aa19.24■□□□□ 0.67
CLN6-210ENST00000635747 RARGP13631 454 aa19.24■□□□□ 0.67
CLN6-210ENST00000635747 GAD2Q05329 585 aa19.24■□□□□ 0.67
CLN6-210ENST00000635747 RHBDF2Q6PJF5 856 aa19.24■□□□□ 0.67
CLN6-210ENST00000635747 HTR3DQ70Z44 454 aa19.24■□□□□ 0.67
CLN6-210ENST00000635747 WDR5BQ86VZ2 330 aa19.24■□□□□ 0.67
CLN6-210ENST00000635747 TRIM59Q8IWR1 403 aa19.24■□□□□ 0.67
CLN6-210ENST00000635747 GPR161Q8N6U8 529 aaKnown RBP19.24■□□□□ 0.67
CLN6-210ENST00000635747 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.24■□□□□ 0.67
CLN6-210ENST00000635747 CLIC5Q9NZA1 410 aa19.24■□□□□ 0.67
CLN6-210ENST00000635747 NAGPAQ9UK23 515 aa19.24■□□□□ 0.67
CLN6-210ENST00000635747 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.24■□□□□ 0.67
CLN6-210ENST00000635747 ZNF292O60281 2723 aa19.24■□□□□ 0.67
CLN6-210ENST00000635747 MYH10P35580 1976 aa19.23■□□□□ 0.67
CLN6-210ENST00000635747 A0A1W2PQH9 124 aa19.23■□□□□ 0.67
CLN6-210ENST00000635747 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.23■□□□□ 0.67
CLN6-210ENST00000635747 PAEPP09466 180 aa19.23■□□□□ 0.67
CLN6-210ENST00000635747 ADH5P11766 374 aa19.23■□□□□ 0.67
CLN6-210ENST00000635747 OPRD1P41143 372 aa19.23■□□□□ 0.67
CLN6-210ENST00000635747 PLA2G4AP47712 749 aa19.23■□□□□ 0.67
CLN6-210ENST00000635747 FNTBP49356 437 aa19.23■□□□□ 0.67
CLN6-210ENST00000635747 BCAT1P54687 386 aa19.23■□□□□ 0.67
CLN6-210ENST00000635747 STX17P56962 302 aa19.23■□□□□ 0.67
CLN6-210ENST00000635747 KCNH2Q12809 1159 aa19.23■□□□□ 0.67
CLN6-210ENST00000635747 LRMPQ12912 555 aa19.23■□□□□ 0.67
CLN6-210ENST00000635747 CAMK4Q16566 473 aa19.23■□□□□ 0.67
CLN6-210ENST00000635747 BTBD8Q5XKL5 378 aa19.23■□□□□ 0.67
CLN6-210ENST00000635747 SYT13Q7L8C5 426 aa19.23■□□□□ 0.67
CLN6-210ENST00000635747 PPM1KQ8N3J5 372 aa19.23■□□□□ 0.67
CLN6-210ENST00000635747 PNKPQ96T60 521 aa19.23■□□□□ 0.67
CLN6-210ENST00000635747 KLF16Q9BXK1 252 aaPredicted RBP19.23■□□□□ 0.67
CLN6-210ENST00000635747 RWDD2AQ9UIY3 292 aa19.23■□□□□ 0.67
CLN6-210ENST00000635747 EP300Q09472 2414 aaPredicted RBP19.23■□□□□ 0.67
CLN6-210ENST00000635747 XPO1O14980 1071 aaKnown RBP19.22■□□□□ 0.67
CLN6-210ENST00000635747 TBX18O95935 607 aa19.22■□□□□ 0.67
CLN6-210ENST00000635747 AFPP02771 609 aaKnown RBP19.22■□□□□ 0.67
CLN6-210ENST00000635747 CD19P15391 556 aa19.22■□□□□ 0.67
CLN6-210ENST00000635747 PGFP49763 221 aa19.22■□□□□ 0.67
CLN6-210ENST00000635747 STILQ15468 1287 aa19.22■□□□□ 0.67
CLN6-210ENST00000635747 GAB4Q2WGN9 574 aa19.22■□□□□ 0.67
CLN6-210ENST00000635747 RAB41Q5JT25 222 aa19.22■□□□□ 0.67
CLN6-210ENST00000635747 C10orf120Q5SQS8 335 aa19.22■□□□□ 0.67
CLN6-210ENST00000635747 NAIF1Q69YI7 327 aaPredicted RBP19.22■□□□□ 0.67
CLN6-210ENST00000635747 NUDT18Q6ZVK8 323 aa19.22■□□□□ 0.67
CLN6-210ENST00000635747 PIGZQ86VD9 579 aa19.22■□□□□ 0.67
CLN6-210ENST00000635747 UBR7Q8N806 425 aa19.22■□□□□ 0.67
CLN6-210ENST00000635747 MLKLQ8NB16 471 aa19.22■□□□□ 0.67
CLN6-210ENST00000635747 EHBP1Q8NDI1 1231 aa19.22■□□□□ 0.67
CLN6-210ENST00000635747 RPLP0P6Q8NHW5 317 aa19.22■□□□□ 0.67
CLN6-210ENST00000635747 NMUR1Q9HB89 426 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms