RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 CCDC175P0C221 793 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 CSH1P0DML2 217 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 CSH2P0DML3 217 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 GJA1P17302 382 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 FLT3P36888 993 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 CCR2P41597 374 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 ADAM15Q13444 863 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 ZNF268Q14587 947 aaPredicted RBP17.42■□□□□ 0.38
CCNA1-203ENST00000625767 VEPH1Q14D04 833 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 CCDC85BQ15834 202 aaPredicted RBP17.42■□□□□ 0.38
CCNA1-203ENST00000625767 RARS2Q5T160 578 aaKnown RBP17.42■□□□□ 0.38
CCNA1-203ENST00000625767 C10orf76Q5T2E6 689 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 DNAJC24Q6P3W2 148 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 EP400NLQ6ZTU2 488 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 MSANTD4Q8NCY6 345 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 C3orf20Q8ND61 904 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 EDEM1Q92611 657 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 FAM149B1Q96BN6 582 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 MCEEQ96PE7 176 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 NUP85Q9BW27 656 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 IL21Q9HBE4 155 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 CLEC1BQ9P126 229 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 DNMT3BQ9UBC3 853 aaKnown RBP17.42■□□□□ 0.38
CCNA1-203ENST00000625767 STRIP2Q9ULQ0 834 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 RTN3O95197 1032 aaPredicted RBP17.42■□□□□ 0.38
CCNA1-203ENST00000625767 RFC1P35251 1148 aaPredicted RBP17.42■□□□□ 0.38
CCNA1-203ENST00000625767 GSCP56915 257 aaPredicted RBP17.42■□□□□ 0.38
CCNA1-203ENST00000625767 PITX1P78337 314 aaPredicted RBP17.42■□□□□ 0.38
CCNA1-203ENST00000625767 OGDHQ02218 1023 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 TAF12Q16514 161 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 SYCE2Q6PIF2 218 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 GAREM2Q75VX8 874 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 GRASPQ7Z6J2 395 aaPredicted RBP17.42■□□□□ 0.38
CCNA1-203ENST00000625767 CPNE8Q86YQ8 564 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 REXO1L1PQ8IX06 675 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 SLC35G2Q8TBE7 412 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 HDAC7Q8WUI4 952 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 TCEAL4Q96EI5 215 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 MYRFLQ96LU7 910 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 ADAM33Q9BZ11 813 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 PRKD2Q9BZL6 878 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 LZTFL1Q9NQ48 299 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 CLDND1Q9NY35 253 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 TMEM59LQ9UK28 342 aa17.42■□□□□ 0.38
CCNA1-203ENST00000625767 PJA2O43164 708 aa17.41■□□□□ 0.38
CCNA1-203ENST00000625767 BUB1O43683 1085 aa17.41■□□□□ 0.38
CCNA1-203ENST00000625767 FBXO21O94952 628 aa17.41■□□□□ 0.38
CCNA1-203ENST00000625767 TFE3P19532 575 aaPredicted RBP17.41■□□□□ 0.38
CCNA1-203ENST00000625767 LTBRP36941 435 aa17.41■□□□□ 0.38
CCNA1-203ENST00000625767 SLC5A9Q2M3M2 681 aa17.41■□□□□ 0.38
CCNA1-203ENST00000625767 CTC1Q2NKJ3 1217 aa17.41■□□□□ 0.38
CCNA1-203ENST00000625767 RAB6CQ53S08 254 aa17.41■□□□□ 0.38
CCNA1-203ENST00000625767 SYPL2Q5VXT5 272 aa17.41■□□□□ 0.38
CCNA1-203ENST00000625767 TMEM184AQ6ZMB5 413 aa17.41■□□□□ 0.38
CCNA1-203ENST00000625767 SLC26A9Q7LBE3 791 aa17.41■□□□□ 0.38
CCNA1-203ENST00000625767 CASP10Q92851 521 aa17.41■□□□□ 0.38
CCNA1-203ENST00000625767 TRMT2BQ96GJ1 504 aaKnown RBP17.41■□□□□ 0.38
CCNA1-203ENST00000625767 ZNF512Q96ME7 567 aaPredicted RBP17.41■□□□□ 0.38
CCNA1-203ENST00000625767 SELENOOQ9BVL4 669 aa17.41■□□□□ 0.38
CCNA1-203ENST00000625767 RAB6CQ9H0N0 254 aa17.41■□□□□ 0.38
CCNA1-203ENST00000625767 FBXO44Q9H4M3 255 aa17.41■□□□□ 0.38
CCNA1-203ENST00000625767 AVENQ9NQS1 362 aaPredicted RBP17.41■□□□□ 0.38
CCNA1-203ENST00000625767 ZDHHC7Q9NXF8 308 aa17.41■□□□□ 0.38
CCNA1-203ENST00000625767 INTUQ9ULD6 942 aa17.41■□□□□ 0.38
CCNA1-203ENST00000625767 NAALADL1Q9UQQ1 740 aa17.41■□□□□ 0.38
CCNA1-203ENST00000625767 PAXBP1Q9Y5B6 917 aa17.41■□□□□ 0.38
CCNA1-203ENST00000625767 LTFP02788 710 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 F11P03951 625 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 HNRNPA1P09651 372 aaKnown RBP eCLIP17.4■□□□□ 0.38
CCNA1-203ENST00000625767 MYBL1P10243 752 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 KRT3P12035 628 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 GABRR2P28476 465 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 HOXA9P31269 272 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 YWHAGP61981 247 aaKnown RBP eCLIP17.4■□□□□ 0.38
CCNA1-203ENST00000625767 CYP4F8P98187 520 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 ZNF252P-AS1Q0IIN9 211 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 CLUL1Q15846 466 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 STXBP5Q5T5C0 1151 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 DAB2IPQ5VWQ8 1189 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 BSPRYQ5W0U4 402 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 PPP1R2P3Q6NXS1 205 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 ANKRD54Q6NXT1 300 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 POTEHQ6S545 545 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 ITIH5Q86UX2 942 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 PPM1EQ8WY54 764 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 RFFLQ8WZ73 363 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 TRIM11Q96F44 468 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 CEP295NLQ96MC4 621 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 GOLPH3Q9H4A6 298 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 SFXN1Q9H9B4 322 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 PARVAQ9NVD7 372 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 MTMR10Q9NXD2 777 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 CALCOCO1Q9P1Z2 691 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 CTTNBP2NLQ9P2B4 639 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 WDR35Q9P2L0 1181 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 ASB3Q9Y575 518 aa17.4■□□□□ 0.38
CCNA1-203ENST00000625767 A0A1W2PRU2 124 aa17.39■□□□□ 0.37
CCNA1-203ENST00000625767 MACROD2A1Z1Q3 448 aa17.39■□□□□ 0.37
CCNA1-203ENST00000625767 SIGLEC16A6NMB1 481 aa17.39■□□□□ 0.37
CCNA1-203ENST00000625767 TBX18O95935 607 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms