RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 FSHRP23945 695 aa14.33□□□□□ -0.12
NEK3-210ENST00000620675 MAPK8IP2Q13387 824 aaPredicted RBP14.33□□□□□ -0.12
NEK3-210ENST00000620675 LEXMQ3ZCV2 418 aa14.33□□□□□ -0.12
NEK3-210ENST00000620675 PTCRAQ6ISU1 281 aaPredicted RBP14.33□□□□□ -0.12
NEK3-210ENST00000620675 MON1BQ7L1V2 547 aa14.33□□□□□ -0.12
NEK3-210ENST00000620675 FMNL3Q8IVF7 1028 aa14.33□□□□□ -0.12
NEK3-210ENST00000620675 KHSRPQ92945 711 aaKnown RBP eCLIP14.33□□□□□ -0.126e-7■■□□□ 14.4
NEK3-210ENST00000620675 PDLIM2Q96JY6 352 aa14.33□□□□□ -0.12
NEK3-210ENST00000620675 SMG9Q9H0W8 520 aaKnown RBP14.33□□□□□ -0.12
NEK3-210ENST00000620675 COG5Q9UP83 839 aa14.33□□□□□ -0.12
NEK3-210ENST00000620675 MDM4O15151 490 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 FYNP06241 537 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 ZDHHC11BP0C7U3 371 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 FECHP22830 423 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 NSFP46459 744 aaKnown RBP14.32□□□□□ -0.12
NEK3-210ENST00000620675 TSR1Q2NL82 804 aaKnown RBP14.32□□□□□ -0.12
NEK3-210ENST00000620675 OR6B2Q6IFH4 312 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 ACAD10Q6JQN1 1059 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 OLFML1Q6UWY5 402 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 RAD9BQ6WBX8 426 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 TRIM72Q6ZMU5 477 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 XYLT1Q86Y38 959 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 NPAS3Q8IXF0 933 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 EDEM1Q92611 657 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 FGF13Q92913 245 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 MCRS1Q96EZ8 462 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 CEP295NLQ96MC4 621 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 PACSIN1Q9BY11 444 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 RNF38Q9H0F5 515 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 FBXO44Q9H4M3 255 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 ZNHIT6Q9NWK9 470 aaKnown RBP14.32□□□□□ -0.12
NEK3-210ENST00000620675 NAGPAQ9UK23 515 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 BZW2Q9Y6E2 419 aaKnown RBP14.32□□□□□ -0.12
NEK3-210ENST00000620675 GOLGA8SH3BPF8 625 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 FTLP02792 175 aaPredicted RBP14.32□□□□□ -0.12
NEK3-210ENST00000620675 GABRB2P47870 512 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 MRPS5P82675 430 aaKnown RBP14.32□□□□□ -0.12
NEK3-210ENST00000620675 CDK17Q00537 523 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 PHF13Q86YI8 300 aaPredicted RBP14.32□□□□□ -0.12
NEK3-210ENST00000620675 MAB21L3Q8N8X9 362 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 C18orf8Q96DM3 657 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 RIPOR3Q96MK2 946 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 SLITRK1Q96PX8 696 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 SLC46A2Q9BY10 475 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 SYNCQ9H7C4 482 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 TRPC7Q9HCX4 862 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 CNGB3Q9NQW8 809 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 ADAM22Q9P0K1 906 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 TFR2Q9UP52 801 aa14.32□□□□□ -0.12
NEK3-210ENST00000620675 KIF26AQ9ULI4 1882 aaPredicted RBP14.31□□□□□ -0.12
NEK3-210ENST00000620675 NCANO14594 1321 aa14.31□□□□□ -0.12
NEK3-210ENST00000620675 SSU72P8A0A1W2PR75 194 aa14.31□□□□□ -0.12
NEK3-210ENST00000620675 RRM1P23921 792 aa14.31□□□□□ -0.12
NEK3-210ENST00000620675 MTHFRP42898 656 aa14.31□□□□□ -0.12
NEK3-210ENST00000620675 ACADSBP45954 432 aa14.31□□□□□ -0.12
NEK3-210ENST00000620675 PITX1P78337 314 aaPredicted RBP14.31□□□□□ -0.12
NEK3-210ENST00000620675 ZXDBP98169 803 aa14.31□□□□□ -0.12
NEK3-210ENST00000620675 SMAD2Q15796 467 aaKnown RBP14.31□□□□□ -0.12
NEK3-210ENST00000620675 SLC18A3Q16572 532 aa14.31□□□□□ -0.12
NEK3-210ENST00000620675 GPR158Q5T848 1215 aa14.31□□□□□ -0.12
NEK3-210ENST00000620675 TRNP1Q6NT89 227 aa14.31□□□□□ -0.12
NEK3-210ENST00000620675 ALKBH5Q6P6C2 394 aaKnown RBP14.31□□□□□ -0.12
NEK3-210ENST00000620675 MCOLN2Q8IZK6 566 aa14.31□□□□□ -0.12
NEK3-210ENST00000620675 NOX5Q96PH1 765 aa14.31□□□□□ -0.12
NEK3-210ENST00000620675 ADAM33Q9BZ11 813 aa14.31□□□□□ -0.12
NEK3-210ENST00000620675 AVENQ9NQS1 362 aaPredicted RBP14.31□□□□□ -0.12
NEK3-210ENST00000620675 TRPM5Q9NZQ8 1165 aa14.31□□□□□ -0.12
NEK3-210ENST00000620675 THEGQ9P2T0 379 aa14.31□□□□□ -0.12
NEK3-210ENST00000620675 AKR1B10O60218 316 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 CDC25CP30307 473 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 YWHAGP61981 247 aaKnown RBP eCLIP14.3□□□□□ -0.12
NEK3-210ENST00000620675 CCDC122Q5T0U0 273 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 SYPL2Q5VXT5 272 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 BSPRYQ5W0U4 402 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 CYP26C1Q6V0L0 522 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 ARL14EPQ8N8R7 260 aaPredicted RBP14.3□□□□□ -0.12
NEK3-210ENST00000620675 RIN3Q8TB24 985 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 FAM149B1Q96BN6 582 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 CCDC42Q96M95 316 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 ISCUQ9H1K1 167 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 DEF6Q9H4E7 631 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 SLITRK6Q9H5Y7 841 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 CYLDQ9NQC7 956 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 UXTQ9UBK9 157 aaPredicted RBP14.3□□□□□ -0.12
NEK3-210ENST00000620675 CCL26Q9Y258 94 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 TCRBV5S1A1TA0A578 114 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 PRAMEF12O95522 483 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 OAS1P00973 400 aaKnown RBP14.3□□□□□ -0.12
NEK3-210ENST00000620675 GZMAP12544 262 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 ABCB4P21439 1286 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 RNASE9P60153 205 aaKnown RBP14.3□□□□□ -0.12
NEK3-210ENST00000620675 MON1AQ86VX9 555 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 EMC1Q8N766 993 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 IPO4Q8TEX9 1081 aaKnown RBP14.3□□□□□ -0.12
NEK3-210ENST00000620675 ARHGEF26Q96DR7 871 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 ZNF830Q96NB3 372 aaPredicted RBP14.3□□□□□ -0.12
NEK3-210ENST00000620675 BAG1Q99933 345 aaPredicted RBP14.3□□□□□ -0.12
NEK3-210ENST00000620675 TLR8Q9NR97 1041 aaKnown RBP14.3□□□□□ -0.12
NEK3-210ENST00000620675 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.3□□□□□ -0.12
NEK3-210ENST00000620675 COMMD8Q9NX08 183 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms