RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	LYN	P07948	512 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	RGS7	P49802	495 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	TMPRSS15	P98073	1019 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	GHRHR	Q02643	423 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	THOC5	Q13769	683 aa	Known RBP	15.06	■□□□□ 0
SMTN-223	ENST00000619644	CNPY1	Q3B7I2	92 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	ADGRD1	Q6QNK2	874 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	TMEM192	Q8IY95	271 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	NSL1	Q96IY1	281 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	RILP	Q96NA2	401 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	TRIM56	Q9BRZ2	755 aa	Known RBP	15.06	■□□□□ 0
SMTN-223	ENST00000619644	OCEL1	Q9H607	264 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	STK32B	Q9NY57	414 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	ZNF212	Q9UDV6	495 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	FARP1	Q9Y4F1	1045 aa	Predicted RBP	15.06	■□□□□ 0
SMTN-223	ENST00000619644	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	15.06	■□□□□ 0
SMTN-223	ENST00000619644	OGT	O15294	1046 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	ERBB2	P04626	1255 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	ENO1	P06733	434 aa	Known RBP	15.06	■□□□□ 0
SMTN-223	ENST00000619644	UBA1	P22314	1058 aa	Known RBP	15.06	■□□□□ 0
SMTN-223	ENST00000619644	EIF4B	P23588	611 aa	Known RBP	15.06	■□□□□ 0
SMTN-223	ENST00000619644	ABCD1	P33897	745 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	SLC25A11	Q02978	314 aa	Known RBP	15.06	■□□□□ 0
SMTN-223	ENST00000619644	TAP1	Q03518	808 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	KDSR	Q06136	332 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	GSTA3	Q16772	222 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	DCAKD	Q8WVC6	231 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	NDN	Q99608	321 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	ASCC2	Q9H1I8	757 aa	Predicted RBP	15.06	■□□□□ 0
SMTN-223	ENST00000619644	SMYD3	Q9H7B4	428 aa		15.06	■□□□□ 0
SMTN-223	ENST00000619644	ZNF395	Q9H8N7	513 aa	Predicted RBP	15.06	■□□□□ 0
SMTN-223	ENST00000619644	MAFB	Q9Y5Q3	323 aa	Predicted RBP	15.06	■□□□□ 0
SMTN-223	ENST00000619644	PTPRA	P18433	802 aa		15.05	■□□□□ 0
SMTN-223	ENST00000619644	ZNF132	P52740	706 aa		15.05	■□□□□ 0
SMTN-223	ENST00000619644	PRPF39	Q86UA1	669 aa	Known RBP	15.05	■□□□□ 0
SMTN-223	ENST00000619644	ALYREF	Q86V81	257 aa	Known RBP	15.05	■□□□□ 0
SMTN-223	ENST00000619644	DTNBP1	Q96EV8	351 aa		15.05	■□□□□ 0
SMTN-223	ENST00000619644	TAS2R1	Q9NYW7	299 aa		15.05	■□□□□ 0
SMTN-223	ENST00000619644	LMCD1	Q9NZU5	365 aa		15.05	■□□□□ 0
SMTN-223	ENST00000619644	PPARGC1A	Q9UBK2	798 aa	Known RBP	15.05	■□□□□ 0
SMTN-223	ENST00000619644	AMPD1	P23109	780 aa		15.05	■□□□□ -0
SMTN-223	ENST00000619644	LAMTOR4	Q0VGL1	99 aa		15.05	■□□□□ -0
SMTN-223	ENST00000619644	BBS12	Q6ZW61	710 aa		15.05	■□□□□ -0
SMTN-223	ENST00000619644	BANP	Q8N9N5	519 aa		15.05	■□□□□ -0
SMTN-223	ENST00000619644	PPP1R14C	Q8TAE6	165 aa		15.05	■□□□□ -0
SMTN-223	ENST00000619644	NFASC	O94856	1347 aa		15.05	■□□□□ -0
SMTN-223	ENST00000619644		I3L4J1	428 aa		15.05	■□□□□ -0
SMTN-223	ENST00000619644	ITGB3	P05106	788 aa		15.05	■□□□□ -0
SMTN-223	ENST00000619644	BSPRY	Q5W0U4	402 aa		15.05	■□□□□ -0
SMTN-223	ENST00000619644	EEF1DP3	Q658K8	133 aa		15.05	■□□□□ -0
SMTN-223	ENST00000619644	ARID3B	Q8IVW6	561 aa	Predicted RBP	15.05	■□□□□ -0
SMTN-223	ENST00000619644	FAM161B	Q96MY7	647 aa		15.05	■□□□□ -0
SMTN-223	ENST00000619644	TWNK	Q96RR1	684 aa		15.05	■□□□□ -0
SMTN-223	ENST00000619644	CNTN6	Q9UQ52	1028 aa		15.05	■□□□□ -0
SMTN-223	ENST00000619644	COL4A5	P29400	1685 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644		H3BRJ5	948 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	MED7	O43513	233 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	PDGFRA	P16234	1089 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	NR1H4	Q96RI1	486 aa	Predicted RBP	15.04	■□□□□ -0
SMTN-223	ENST00000619644	TUBGCP5	Q96RT8	1024 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	TUBB6	Q9BUF5	446 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	SPATA16	Q9BXB7	569 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	AFG3L2	Q9Y4W6	797 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	ADGRA2	Q96PE1	1338 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	C3orf70	A6NLC5	250 aa	Predicted RBP	15.04	■□□□□ -0
SMTN-223	ENST00000619644	TM9SF1	O15321	606 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	ASPA	P45381	313 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	MROH9	Q5TGP6	573 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	DCAF15	Q66K64	600 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	CASC4	Q6P4E1	433 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	ACAP3	Q96P50	834 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	ACO2	Q99798	780 aa	Known RBP	15.04	■□□□□ -0
SMTN-223	ENST00000619644	ZNF518B	Q9C0D4	1074 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	PIH1D1	Q9NWS0	290 aa	Known RBP	15.04	■□□□□ -0
SMTN-223	ENST00000619644	CYB561D2	O14569	222 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	NDC80	O14777	642 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	CREB3	O43889	395 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	PRPSAP2	O60256	369 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	MSC	O60682	206 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	CLCN3	P51790	818 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	FAM160B1	Q5W0V3	765 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	IZUMO2	Q6UXV1	221 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	ZCCHC23	Q6ZST2	131 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	ARHGAP18	Q8N392	663 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	OPTN	Q96CV9	577 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	SRPK1	Q96SB4	655 aa	Known RBP	15.04	■□□□□ -0
SMTN-223	ENST00000619644	VCX3B	Q9H321	246 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	MMADHC	Q9H3L0	296 aa	Predicted RBP	15.04	■□□□□ -0
SMTN-223	ENST00000619644	RPF1	Q9H9Y2	349 aa	Known RBP	15.04	■□□□□ -0
SMTN-223	ENST00000619644	VCX3A	Q9NNX9	186 aa		15.04	■□□□□ -0
SMTN-223	ENST00000619644	ZC3H7B	Q9UGR2	993 aa	Known RBP	15.04	■□□□□ -0
SMTN-223	ENST00000619644	G3BP2	Q9UN86	482 aa	Known RBP	15.04	■□□□□ -0
SMTN-223	ENST00000619644	TCRBV5S1A1T	A0A578	114 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	APOC4-APOC2	K7ER74	178 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	UGT1A9	O60656	530 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	ITGBL1	O95965	494 aa	Predicted RBP	15.03	■□□□□ -0
SMTN-223	ENST00000619644	ZBED1	O96006	694 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	APOC2	P02655	101 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	GMPS	P49915	693 aa	Predicted RBP	15.03	■□□□□ -0
SMTN-223	ENST00000619644	MAP3K10	Q02779	954 aa		15.03	■□□□□ -0

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms