RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CHMP2BQ9UQN3 213 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 I3L4J1 428 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 CDH16O75309 829 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 DRD4P21917 467 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 NDUFV1P49821 464 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 BCAR1P56945 870 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 LILRA4P59901 499 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 PKN2Q16513 984 aaKnown RBP12.94□□□□□ -0.34
CIITA-212ENST00000618207 GKAP1Q5VSY0 366 aaPredicted RBP12.94□□□□□ -0.34
CIITA-212ENST00000618207 MFSD5Q6N075 450 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 CACNA2D3Q8IZS8 1091 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 LRRC52Q8N7C0 313 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 RNF157Q96PX1 679 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 SLC4A5Q9BY07 1137 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 MFHAS1Q9Y4C4 1052 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 CDY2AQ9Y6F7 541 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 A0A087WUV0 522 aaPredicted RBP12.94□□□□□ -0.34
CIITA-212ENST00000618207 TCP11X1B4DZS4 312 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 PIRO00625 290 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 IL4RP24394 825 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 RBL1P28749 1068 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 PTPN7P35236 360 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 PCK1P35558 622 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 ADIGQ0VDE8 80 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 SPRED3Q2MJR0 410 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 C17orf99Q6UX52 265 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 CROCCP2Q86T23 111 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 IFNL1Q8IU54 200 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 FBXO36Q8NEA4 188 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 TRPV1Q8NER1 839 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 PCDH19Q8TAB3 1148 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 HASPINQ8TF76 798 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 FAXDC2Q96IV6 333 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 KLF6Q99612 283 aaPredicted RBP12.94□□□□□ -0.34
CIITA-212ENST00000618207 MED10Q9BTT4 135 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 PCDH18Q9HCL0 1135 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 GABRQQ9UN88 632 aa12.94□□□□□ -0.34
CIITA-212ENST00000618207 CASTOR2A6NHX0 329 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 GOLGA8RI6L899 631 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 HAS3O00219 553 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 CYB561D2O14569 222 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 PTGESO14684 152 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 STAU1O95793 577 aaKnown RBP12.93□□□□□ -0.34
CIITA-212ENST00000618207 CD4P01730 458 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 CRYBB1P53674 252 aaPredicted RBP12.93□□□□□ -0.34
CIITA-212ENST00000618207 BST2Q10589 180 aaKnown RBP12.93□□□□□ -0.34
CIITA-212ENST00000618207 C3orf62Q6ZUJ4 267 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 TMEM110Q86TL2 294 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 PPIL6Q8IXY8 311 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 CCDC185Q8N715 623 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 PLD5Q8N7P1 536 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 CCDC110Q8TBZ0 833 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 ADAM32Q8TC27 787 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 PAAF1Q9BRP4 392 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 RAB6BQ9NRW1 208 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 FGFR1OP2Q9NVK5 253 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 DONSONQ9NYP3 566 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 GSCP56915 257 aaPredicted RBP12.93□□□□□ -0.34
CIITA-212ENST00000618207 GPX6P59796 221 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 CDC42EP1Q00587 391 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 STAT4Q14765 748 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 STILQ15468 1287 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 SMAD1Q15797 465 aaKnown RBP12.93□□□□□ -0.34
CIITA-212ENST00000618207 DCAF6Q58WW2 860 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 ANKRD20A8PQ5CZ79 823 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 TNFAIP8L3Q5GJ75 292 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 NUGGCQ68CJ6 796 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 GDF6Q6KF10 455 aaPredicted RBP12.93□□□□□ -0.34
CIITA-212ENST00000618207 SAPCD2Q86UD0 394 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 PIGZQ86VD9 579 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 MAP7D3Q8IWC1 876 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 PALM2Q8IXS6 379 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 ANKRD52Q8NB46 1076 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 FAF2Q96CS3 445 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 ZNF560Q96MR9 790 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 ZNF317Q96PQ6 595 aaPredicted RBP12.93□□□□□ -0.34
CIITA-212ENST00000618207 ST3GAL5Q9UNP4 418 aa12.93□□□□□ -0.34
CIITA-212ENST00000618207 ZNF638Q14966 1978 aaKnown RBP12.92□□□□□ -0.34
CIITA-212ENST00000618207 GOLGA6L7A0A1B0GV03 622 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 A0A1W2PPM1 405 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 MANSC4A6NHS7 340 aaPredicted RBP12.92□□□□□ -0.34
CIITA-212ENST00000618207 M0QZ92 97 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 APOL1O14791 398 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 GCAP28676 217 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 STX2P32856 288 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 BCAT1P54687 386 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 GBE1Q04446 702 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 NME3Q13232 169 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 ACAP1Q15027 740 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 MDH1BQ5I0G3 518 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 RGMBQ6NW40 437 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 TTC39CQ8N584 583 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 PQLC3Q8N755 202 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 B3GALNT2Q8NCR0 500 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 TBCBQ99426 244 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 APBA2Q99767 749 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 RASSF4Q9H2L5 321 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 C12orf65Q9H3J6 166 aaKnown RBP12.92□□□□□ -0.34
CIITA-212ENST00000618207 PRDM16Q9HAZ2 1276 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 SHOC2Q9UQ13 582 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms