RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-225ENST00000617087 GATA3P23771 443 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 HIBADHP31937 336 aaKnown RBP6.32□□□□□ -1.4
PVT1-225ENST00000617087 TSPAN7P41732 249 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 SP2Q02086 613 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 MAPK7Q13164 816 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 SLC12A1Q13621 1099 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 CSHL1Q14406 222 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 ACOX1Q15067 660 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 DLGAP5Q15398 846 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 GEN1Q17RS7 908 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 DEPDC1Q5TB30 811 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 MAP3K21Q5TCX8 1036 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 MSANTD2Q6P1R3 559 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 CLEC9AQ6UXN8 241 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 TBC1D1Q86TI0 1168 aaPredicted RBP6.32□□□□□ -1.4
PVT1-225ENST00000617087 TRABD2AQ86V40 505 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 C1QL4Q86Z23 238 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 IZUMO1Q8IYV9 350 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 TMEM57Q8N5G2 664 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 OSCP1Q8WVF1 389 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 ATRIPQ8WXE1 791 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 ATG4AQ8WYN0 398 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 TMEM125Q96AQ2 219 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 HAPLN3Q96S86 360 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 PAAF1Q9BRP4 392 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 C17orf80Q9BSJ5 609 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 VN1R3Q9BXE9 311 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 BRD8Q9H0E9 1235 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 TMX4Q9H1E5 349 aaPredicted RBP6.32□□□□□ -1.4
PVT1-225ENST00000617087 UNKLQ9H9P5 680 aaKnown RBP6.32□□□□□ -1.4
PVT1-225ENST00000617087 JMJD4Q9H9V9 463 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 NDUFAF4Q9P032 175 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 SORCS3Q9UPU3 1222 aa6.32□□□□□ -1.4
PVT1-225ENST00000617087 FAM90A20PA6NIJ5 464 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 SCAF4O95104 1147 aaKnown RBP6.31□□□□□ -1.4
PVT1-225ENST00000617087 CER1O95813 267 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 TFRCP02786 760 aaKnown RBP6.31□□□□□ -1.4
PVT1-225ENST00000617087 LDHCP07864 332 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 CNPP09543 421 aaKnown RBP6.31□□□□□ -1.4
PVT1-225ENST00000617087 CAPN3P20807 821 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 CFPP27918 469 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 SERPINA4P29622 427 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 KRT9P35527 623 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 NR1H2P55055 460 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 MTAPQ13126 283 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 RRP1BQ14684 758 aaKnown RBP6.31□□□□□ -1.4
PVT1-225ENST00000617087 RPS6KA2Q15349 733 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 LY6KQ17RY6 165 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 SLC9A4Q6AI14 798 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 GLB1LQ6UWU2 654 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 RINLQ6ZS11 566 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 LRRC56Q8IYG6 542 aaPredicted RBP6.31□□□□□ -1.4
PVT1-225ENST00000617087 TSPYL6Q8N831 410 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 CEP70Q8NHQ1 597 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 CPT1BQ92523 772 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 HDAC2Q92769 488 aaKnown RBP6.31□□□□□ -1.4
PVT1-225ENST00000617087 GOLGA1Q92805 767 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 TOX2Q96NM4 488 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 CHODLQ9H9P2 273 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 NOD2Q9HC29 1040 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 SMC4Q9NTJ3 1288 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 INTS13Q9NVM9 706 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 PI4KBQ9UBF8 816 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 DERAQ9Y315 318 aa6.31□□□□□ -1.4
PVT1-225ENST00000617087 KAT6BQ8WYB5 2073 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 CCDC196A0A1B0GTZ2 297 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 GAGE12BA1L429 117 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 GAGE12HA6NDE8 117 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 ZNF623O75123 536 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 KRT38O76015 456 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 LARGE1O95461 756 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 IFIT1P09914 478 aaKnown RBP6.3□□□□□ -1.4
PVT1-225ENST00000617087 ATP1A3P13637 1013 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 MCM2P49736 904 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 VAV2P52735 878 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 ATXN1P54253 815 aaKnown RBP6.3□□□□□ -1.4
PVT1-225ENST00000617087 FAM189BP81408 668 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 GALNTL6Q49A17 601 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 PIK3AP1Q6ZUJ8 805 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 DTX2Q86UW9 622 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 FSTL5Q8N475 847 aaPredicted RBP6.3□□□□□ -1.4
PVT1-225ENST00000617087 METTL25Q8N6Q8 603 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 C11orf44Q8N8P7 122 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 EDAQ92838 391 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 FUBP1Q96AE4 644 aaKnown RBP6.3□□□□□ -1.4
PVT1-225ENST00000617087 HVCN1Q96D96 273 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 RNF31Q96EP0 1072 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 ALOXE3Q9BYJ1 711 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 OSBPL5Q9H0X9 879 aaPredicted RBP6.3□□□□□ -1.4
PVT1-225ENST00000617087 ABHD16BQ9H3Z7 469 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 ZNF768Q9H5H4 540 aaKnown RBP6.3□□□□□ -1.4
PVT1-225ENST00000617087 GALNT9Q9HCQ5 603 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 TRIM36Q9NQ86 728 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 STEAP1Q9UHE8 339 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 JAG2Q9Y219 1238 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 DRG1Q9Y295 367 aaKnown RBP6.3□□□□□ -1.4
PVT1-225ENST00000617087 MAP3K2Q9Y2U5 619 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 NOX1Q9Y5S8 564 aa6.3□□□□□ -1.4
PVT1-225ENST00000617087 GXYLT2A0PJZ3 443 aa6.29□□□□□ -1.4
PVT1-225ENST00000617087 OTOL1A6NHN0 477 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms