RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 TYW5A2RUC4 315 aaKnown RBP13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 SPECC1L-ADORA2AF8WAN1 911 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 MTA2O94776 668 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 ODC1P11926 461 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 FCGRTP55899 365 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 STX3Q13277 289 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 DCAF12L1Q5VU92 463 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 C4orf50Q6ZRC1 276 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 ATPAF2Q8N5M1 289 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 ADAM32Q8TC27 787 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 EXT2Q93063 718 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 GAD1Q99259 594 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 ABI2Q9NYB9 513 aaPredicted RBP13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 COL22A1Q8NFW1 1626 aaPredicted RBP13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 PIAS1O75925 651 aa13.68□□□□□ -0.22
PPP4R3B-206ENST00000616407 DPYSL3Q14195 570 aa13.68□□□□□ -0.22
PPP4R3B-206ENST00000616407 DUSP28Q4G0W2 176 aa13.68□□□□□ -0.22
PPP4R3B-206ENST00000616407 ALLCQ8N6M5 410 aa13.68□□□□□ -0.22
PPP4R3B-206ENST00000616407 FBXO41Q8TF61 875 aa13.68□□□□□ -0.22
PPP4R3B-206ENST00000616407 EDEM1Q92611 657 aa13.68□□□□□ -0.22
PPP4R3B-206ENST00000616407 SYT15Q9BQS2 421 aa13.68□□□□□ -0.22
PPP4R3B-206ENST00000616407 RPS6KL1Q9Y6S9 549 aa13.68□□□□□ -0.22
PPP4R3B-206ENST00000616407 AXLP30530 894 aa13.68□□□□□ -0.22
PPP4R3B-206ENST00000616407 RPL22P35268 128 aaKnown RBP13.68□□□□□ -0.22
PPP4R3B-206ENST00000616407 TAF2Q6P1X5 1199 aa13.68□□□□□ -0.22
PPP4R3B-206ENST00000616407 RNF135Q8IUD6 432 aa13.68□□□□□ -0.22
PPP4R3B-206ENST00000616407 DDX27Q96GQ7 796 aaKnown RBP13.68□□□□□ -0.22
PPP4R3B-206ENST00000616407 GLT1D1Q96MS3 346 aa13.68□□□□□ -0.22
PPP4R3B-206ENST00000616407 SLC40A1Q9NP59 571 aa13.68□□□□□ -0.22
PPP4R3B-206ENST00000616407 CFHP08603 1231 aa13.68□□□□□ -0.22
PPP4R3B-206ENST00000616407 BBS12Q6ZW61 710 aa13.68□□□□□ -0.22
PPP4R3B-206ENST00000616407 PABPC5Q96DU9 382 aaKnown RBP13.68□□□□□ -0.22
PPP4R3B-206ENST00000616407 KBTBD13C9JR72 458 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 TRUB2O95900 331 aaKnown RBP13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 GHRP10912 638 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 AKR1A1P14550 325 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 LHX1P48742 406 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 EPHB1P54762 984 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 SREBF2Q12772 1141 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 PPP1R26Q5T8A7 1209 aaPredicted RBP13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 CXCL17Q6UXB2 119 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 ZDHHC17Q8IUH5 632 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 PDCD6IPQ8WUM4 868 aaKnown RBP13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 NXF3Q9H4D5 531 aaKnown RBP13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 NOP53Q9NZM5 478 aaKnown RBP13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 CFLARO15519 480 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 ERBB2P04626 1255 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 TGM2P21980 687 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 FDFT1P37268 417 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 MBTD1Q05BQ5 628 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 ICE2Q659A1 982 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 KLC3Q6P597 504 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 KCNT2Q6UVM3 1135 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 POLNQ7Z5Q5 900 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 HIPK4Q8NE63 616 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 IPMKQ8NFU5 416 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 IFT43Q96FT9 208 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 APOL2Q9BQE5 337 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 ELOVL4Q9GZR5 314 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 PIH1D1Q9NWS0 290 aaKnown RBP13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 BCAP29Q9UHQ4 241 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 SLC15A5A6NIM6 579 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 DCDC2CA8MYV0 355 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 GRM5P41594 1212 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 PRAMEP78395 509 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 BMPR2Q13873 1038 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 SLC26A11Q86WA9 606 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 UNC93AQ86WB7 457 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 TMEM192Q8IY95 271 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 LRRN4Q8WUT4 740 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 C18orf25Q96B23 403 aaPredicted RBP13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 WWP1Q9H0M0 922 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 PDZD7Q9H5P4 517 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 C20orf96Q9NUD7 363 aaPredicted RBP13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 LTBP3Q9NS15 1303 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 MANSC4A6NHS7 340 aaPredicted RBP13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 SDR42E2A6NKP2 422 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 BANF1O75531 89 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 PTGIRP43119 386 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 SCTRP47872 440 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 EXOC3L1Q86VI1 746 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 COLGALT1Q8NBJ5 622 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 LHX5Q9H2C1 402 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 FZD8Q9H461 694 aa13.67□□□□□ -0.22
PPP4R3B-206ENST00000616407 F9P00740 461 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 PYGBP11216 843 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 RAD23BP54727 409 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 ITIH4Q14624 930 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 TAF11Q15544 211 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 PCSK7Q16549 785 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 ZC3H12AQ5D1E8 599 aaKnown RBP13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 MAP3K21Q5TCX8 1036 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 WSCD1Q658N2 575 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 RAB44Q7Z6P3 723 aaPredicted RBP13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 E2F7Q96AV8 911 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 MRPL45Q9BRJ2 306 aaKnown RBP13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 SNRNP25Q9BV90 132 aaKnown RBP13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 TMEM59LQ9UK28 342 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 COL2A1P02458 1487 aaPredicted RBP13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 GLTPD2A6NH11 291 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms