RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 LEO1Q8WVC0 666 aaPredicted RBP7.36□□□□□ -1.23
MUC1-227ENST00000615517 KCNB2Q92953 911 aa7.36□□□□□ -1.23
MUC1-227ENST00000615517 IGSF8Q969P0 613 aa7.36□□□□□ -1.23
MUC1-227ENST00000615517 JAKMIP1Q96N16 626 aaKnown RBP7.36□□□□□ -1.23
MUC1-227ENST00000615517 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.36□□□□□ -1.23
MUC1-227ENST00000615517 TRIM9Q9C026 710 aa7.36□□□□□ -1.23
MUC1-227ENST00000615517 FAM117AQ9C073 453 aa7.36□□□□□ -1.23
MUC1-227ENST00000615517 CCSER1Q9C0I3 900 aa7.36□□□□□ -1.23
MUC1-227ENST00000615517 MKRN2Q9H000 416 aaKnown RBP7.36□□□□□ -1.23
MUC1-227ENST00000615517 BHMT2Q9H2M3 363 aa7.36□□□□□ -1.23
MUC1-227ENST00000615517 KMT5AQ9NQR1 393 aa7.36□□□□□ -1.23
MUC1-227ENST00000615517 HSPBP1Q9NZL4 362 aa7.36□□□□□ -1.23
MUC1-227ENST00000615517 CFAP97Q9P2B7 532 aa7.36□□□□□ -1.23
MUC1-227ENST00000615517 DEC1Q9P2X7 70 aa7.36□□□□□ -1.23
MUC1-227ENST00000615517 DSEQ9UL01 958 aa7.36□□□□□ -1.23
MUC1-227ENST00000615517 ZNF840PA6NDX5 716 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 SFI1A8K8P3 1242 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 CLDN3O15551 220 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 ZBTB24O43167 697 aaPredicted RBP7.35□□□□□ -1.23
MUC1-227ENST00000615517 HOXC11O43248 304 aaPredicted RBP7.35□□□□□ -1.23
MUC1-227ENST00000615517 XPOTO43592 962 aaKnown RBP7.35□□□□□ -1.23
MUC1-227ENST00000615517 HCRTO43612 131 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 NEMFO60524 1076 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 LDOC1O95751 146 aaPredicted RBP7.35□□□□□ -1.23
MUC1-227ENST00000615517 OAS1P00973 400 aaKnown RBP7.35□□□□□ -1.23
MUC1-227ENST00000615517 C1SP09871 688 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 PYGBP11216 843 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 PFKLP17858 780 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 CR2P20023 1033 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 GLDCP23378 1020 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 PAX3P23760 479 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 ACAT1P24752 427 aaKnown RBP7.35□□□□□ -1.23
MUC1-227ENST00000615517 GRIK1P39086 918 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 CTSKP43235 329 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 CCR10P46092 362 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 TPMTP51580 245 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 AFF3P51826 1226 aaKnown RBP7.35□□□□□ -1.23
MUC1-227ENST00000615517 PCBP4P57723 403 aaKnown RBP7.35□□□□□ -1.23
MUC1-227ENST00000615517 TOB2Q14106 344 aaPredicted RBP7.35□□□□□ -1.23
MUC1-227ENST00000615517 SHBQ15464 509 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 NFE2Q16621 373 aaPredicted RBP7.35□□□□□ -1.23
MUC1-227ENST00000615517 FUT11Q495W5 492 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 C4orf17Q53FE4 359 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 PRAMEF14Q5SWL7 426 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 C6orf132Q5T0Z8 1188 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 HIST2H2BCQ6DN03 193 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 BLOC1S2Q6QNY1 142 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 ZPBP2Q6X784 338 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 TMEM25Q86YD3 366 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 SCN4BQ8IWT1 228 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 SPOCK2Q92563 424 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 WBP2Q969T9 261 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 CNDP2Q96KP4 475 aaKnown RBP7.35□□□□□ -1.23
MUC1-227ENST00000615517 LARP6Q9BRS8 491 aaKnown RBP7.35□□□□□ -1.23
MUC1-227ENST00000615517 TM9SF3Q9HD45 589 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 ABCB6Q9NP58 842 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 GTF3C4Q9UKN8 822 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 SRPK3Q9UPE1 567 aa7.35□□□□□ -1.23
MUC1-227ENST00000615517 RBM19Q9Y4C8 960 aaKnown RBP7.35□□□□□ -1.23
MUC1-227ENST00000615517 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.35□□□□□ -1.23
MUC1-227ENST00000615517 HEMK1Q9Y5R4 338 aaPredicted RBP7.35□□□□□ -1.23
MUC1-227ENST00000615517 SPENQ96T58 3664 aaKnown RBP7.34□□□□□ -1.23
MUC1-227ENST00000615517 A0A1B0GTQ1 180 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 K7ENP7 123 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 KLK10O43240 276 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 SUV39H1O43463 412 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 IGLV3-19P01714 112 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 AFPP02771 609 aaKnown RBP7.34□□□□□ -1.23
MUC1-227ENST00000615517 MAPTP10636 758 aaKnown RBP7.34□□□□□ -1.23
MUC1-227ENST00000615517 CDK4P11802 303 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 GRIA4P48058 902 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 TAF6P49848 677 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 PDE6CP51160 858 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 INSM1Q01101 510 aaPredicted RBP7.34□□□□□ -1.23
MUC1-227ENST00000615517 TSPY1Q01534 308 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 LINC00303Q3SY05 128 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 INTS6LQ5JSJ4 861 aaKnown RBP7.34□□□□□ -1.23
MUC1-227ENST00000615517 SCARA3Q6AZY7 606 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 SDE2Q6IQ49 451 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 INO80CQ6PI98 192 aaPredicted RBP7.34□□□□□ -1.23
MUC1-227ENST00000615517 ATG14Q6ZNE5 492 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 OSTM1Q86WC4 334 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 BBS7Q8IWZ6 715 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 DHX40Q8IX18 779 aaKnown RBP7.34□□□□□ -1.23
MUC1-227ENST00000615517 CACTIN-AS1Q8N1I8 211 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 DCBLD1Q8N8Z6 715 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 TMEM161BQ8NDZ6 487 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 RFFLQ8WZ73 363 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 DRC1Q96MC2 740 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 ZNF578Q96N58 590 aaPredicted RBP7.34□□□□□ -1.23
MUC1-227ENST00000615517 TSPAN18Q96SJ8 248 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 ACBD6Q9BR61 282 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 ORAI3Q9BRQ5 295 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 NTPCRQ9BSD7 190 aaKnown RBP7.34□□□□□ -1.23
MUC1-227ENST00000615517 RUSC1Q9BVN2 902 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 C6orf106Q9H6K1 298 aaPredicted RBP7.34□□□□□ -1.23
MUC1-227ENST00000615517 OSGEPQ9NPF4 335 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 TRPM5Q9NZQ8 1165 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 LRWD1Q9UFC0 647 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 PCDHB1Q9Y5F3 818 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms