RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 ZSWIM2Q8NEG5 633 aa9.19□□□□□ -0.94
VPS11-206ENST00000614944 DNAJB3Q8WWF6 145 aa9.19□□□□□ -0.94
VPS11-206ENST00000614944 ZBTB45Q96K62 511 aaPredicted RBP9.19□□□□□ -0.94
VPS11-206ENST00000614944 SCYL1Q96KG9 808 aa9.19□□□□□ -0.94
VPS11-206ENST00000614944 GLT1D1Q96MS3 346 aa9.19□□□□□ -0.94
VPS11-206ENST00000614944 SEMA4AQ9H3S1 761 aa9.19□□□□□ -0.94
VPS11-206ENST00000614944 ERVK-5Q9HDB9 667 aa9.19□□□□□ -0.94
VPS11-206ENST00000614944 A0A1W2PQ45 241 aaPredicted RBP9.18□□□□□ -0.94
VPS11-206ENST00000614944 A0A1W2PQY0 241 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 CCT8L1PA6NM43 557 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 GOLGA8TH3BQL2 631 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 TMCC2O75069 709 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 ZNF623O75123 536 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 TRIM49P0CI25 452 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 TRIM49CP0CI26 452 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 COL6A1P12109 1028 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 NR1D1P20393 614 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 BASP1P80723 227 aaKnown RBP9.18□□□□□ -0.94
VPS11-206ENST00000614944 DSC3Q14574 896 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 UBXN11Q5T124 520 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 EEF1DP3Q658K8 133 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 TREML1Q86YW5 311 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 CCNJLQ8IV13 435 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 GALNT6Q8NCL4 622 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 STARD8Q92502 1023 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 EEF2KMTQ96G04 330 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 ANKRD36BP1Q96IX9 119 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 PCMTD1Q96MG8 357 aaPredicted RBP9.18□□□□□ -0.94
VPS11-206ENST00000614944 NT5C1BQ96P26 610 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 CNGB3Q9NQW8 809 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 FAM207AQ9NSI2 230 aaPredicted RBP9.18□□□□□ -0.94
VPS11-206ENST00000614944 MOSPD1Q9UJG1 213 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 ACAD8Q9UKU7 415 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 TRIM17Q9Y577 477 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 KBTBD13C9JR72 458 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 MAGEB3O15480 346 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 B4GALT5O43286 388 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 NDUFA10O95299 355 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 VNN1O95497 513 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 CD4P01730 458 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 GLI1P08151 1106 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 STAG3L1P0CL83 205 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 CYTH1Q15438 398 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 ASIC2Q16515 512 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 CCDC14Q49A88 953 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 TDRD10Q5VZ19 366 aaKnown RBP9.18□□□□□ -0.94
VPS11-206ENST00000614944 SIGIRRQ6IA17 410 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 ALKBH2Q6NS38 261 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 FBXO46Q6PJ61 603 aaPredicted RBP9.18□□□□□ -0.94
VPS11-206ENST00000614944 TRAF7Q6Q0C0 670 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 RAD9BQ6WBX8 426 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 CCDC81Q6ZN84 652 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 CTU1Q7Z7A3 348 aaKnown RBP9.18□□□□□ -0.94
VPS11-206ENST00000614944 SH2D3CQ8N5H7 860 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 C7orf57Q8NEG2 295 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 BRSK1Q8TDC3 778 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 UBN1Q9NPG3 1134 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 DNAJC12Q9UKB3 198 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 EPN1Q9Y6I3 576 aaPredicted RBP9.18□□□□□ -0.94
VPS11-206ENST00000614944 SCINQ9Y6U3 715 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 GOLGA8IPA6NC78 632 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 GOLGA8JA6NMD2 632 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 ASS1P00966 412 aaKnown RBP9.18□□□□□ -0.94
VPS11-206ENST00000614944 GJB1P08034 283 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 SERPINB6P35237 376 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 GCLMP48507 274 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 POLD2P49005 469 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 GALK1P51570 392 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 MRPS25P82663 173 aaKnown RBP9.18□□□□□ -0.94
VPS11-206ENST00000614944 DPYSQ14117 519 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 ODF2Q5BJF6 829 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 C1orf228Q6PIY5 440 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 ARHGEF18Q6ZSZ5 1173 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 RRAGAQ7L523 313 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 TRMT1LQ7Z2T5 733 aaKnown RBP9.18□□□□□ -0.94
VPS11-206ENST00000614944 TOR1AIP2Q8NFQ8 470 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 SLC30A5Q8TAD4 765 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 SPATA18Q8TC71 538 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 DIS3LQ8TF46 1054 aaKnown RBP9.18□□□□□ -0.94
VPS11-206ENST00000614944 PRCCQ92733 491 aaPredicted RBP9.18□□□□□ -0.94
VPS11-206ENST00000614944 DPF3Q92784 378 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 GFM2Q969S9 779 aaKnown RBP9.18□□□□□ -0.94
VPS11-206ENST00000614944 TOX2Q96NM4 488 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 ACAP3Q96P50 834 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 NHEJ1Q9H9Q4 299 aaPredicted RBP9.18□□□□□ -0.94
VPS11-206ENST00000614944 TCF7L2Q9NQB0 619 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 ARHGAP20Q9P2F6 1191 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 ANKFY1Q9P2R3 1169 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 XPO7Q9UIA9 1087 aaKnown RBP9.18□□□□□ -0.94
VPS11-206ENST00000614944 SLC12A4Q9UP95 1085 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 TDRKHQ9Y2W6 561 aaKnown RBP9.18□□□□□ -0.94
VPS11-206ENST00000614944 CDY2AQ9Y6F7 541 aa9.18□□□□□ -0.94
VPS11-206ENST00000614944 GOLGA8CPA6NN73 597 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 FAM47E-STBD1D6RA91 191 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 PITPNM1O00562 1244 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 FBP2O00757 339 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 TNNC2P02585 160 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 YWHAEP62258 255 aaKnown RBP9.17□□□□□ -0.94
VPS11-206ENST00000614944 CATSPER4Q7RTX7 472 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 ANKRD33Q7Z3H0 272 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms