RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 SNRNP27Q8WVK2 155 aaKnown RBP11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 FRMD8Q9BZ67 464 aaPredicted RBP11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 INO80BQ9C086 356 aaPredicted RBP11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SAYSD1Q9NPB0 183 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PDGFCQ9NRA1 345 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ASNSD1Q9NWL6 643 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 POLIQ9UNA4 740 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ZSCAN5DPP0CG00 497 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ARF4P18085 180 aaPredicted RBP11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 MARK3P27448 753 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 AXLP30530 894 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 RASSF2P50749 326 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 P3H1Q32P28 736 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ARHGAP17Q68EM7 881 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 C4orf22Q6V702 233 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CYP4V2Q6ZWL3 525 aaPredicted RBP11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 UNC93AQ86WB7 457 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 KIAA0319LQ8IZA0 1049 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 NAT8LQ8N9F0 302 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CFAP61Q8NHU2 1237 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 GRAMD1AQ96CP6 724 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 FAF2Q96CS3 445 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CPXM1Q96SM3 734 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SLC4A5Q9BY07 1137 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ADAMTS10Q9H324 1103 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 RSAD1Q9HA92 442 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 RXFP1Q9HBX9 757 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 GBA2Q9HCG7 927 aaPredicted RBP11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SCOCQ9UIL1 159 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ZFP69BQ9UJL9 534 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CITO14578 2027 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SNAI1O95863 264 aaPredicted RBP11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ALDH3A1P30838 453 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 STIP1P31948 543 aaKnown RBP11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 EPHX2P34913 555 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CLCN3P51790 818 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ACVR2BQ13705 512 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 KPNB1Q14974 876 aaKnown RBP11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TMEM132DQ14C87 1099 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 FAM47CQ5HY64 1035 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PPP1R21Q6ZMI0 780 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TMEM110Q86TL2 294 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 DENND1AQ8TEH3 1009 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 COPS5Q92905 334 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 MAGEB18Q96M61 343 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 RBM15Q96T37 977 aaKnown RBP eCLIP11.31□□□□□ -0.68e-9■■■□□ 17.4
SENP3-EIF4A1-201ENST00000614237 TBCBQ99426 244 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 RNPEPL1Q9HAU8 725 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 EVPLQ92817 2033 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 MBLAC1A4D2B0 266 aaPredicted RBP11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 C2CD4BA6NLJ0 364 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 USP1O94782 785 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 IGHA2P01877 340 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CALB2P22676 271 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PSMA2P25787 234 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 GTF2A2P52657 109 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SNX16P57768 344 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 DYNLT1P63172 113 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 IL9RQ01113 521 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PDK2Q15119 407 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ATP13A4Q4VNC1 1196 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SPDYAQ5MJ70 313 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TMEM63BQ5T3F8 832 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SNX30Q5VWJ9 437 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PPIL6Q8IXY8 311 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TMEM192Q8IY95 271 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 EFCAB3Q8N7B9 438 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 NLRP4Q96MN2 994 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SMC6Q96SB8 1091 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CNPY3Q9BT09 278 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 C11orf84Q9BUA3 381 aaPredicted RBP11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 FBXO6Q9NRD1 293 aaPredicted RBP11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PRKAG3Q9UGI9 489 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CCDC195A0A1B0GUA6 201 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 KIF3CO14782 793 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ITGBL1O95965 494 aaPredicted RBP11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PFKMP08237 780 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ETS1P14921 441 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 IL1R2P27930 398 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 RPS6KA3P51812 740 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PSMC1P62191 440 aaKnown RBP11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 EFHC2Q5JST6 749 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 MAGEC3Q8TD91 643 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SCG3Q8WXD2 468 aaKnown RBP11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CCDC124Q96CT7 223 aaKnown RBP11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PRR11Q96HE9 360 aaPredicted RBP11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 HPDLQ96IR7 371 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 FAM161BQ96MY7 647 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ACAP3Q96P50 834 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SPON1Q9HCB6 807 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TXLNGQ9NUQ3 528 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 NMRK1Q9NWW6 199 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 RNF181Q9P0P0 153 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CHKBQ9Y259 395 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 WASF2Q9Y6W5 498 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PCNTO95613 3336 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PEX11AO75192 247 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 UNC5CO95185 931 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 KDSRQ06136 332 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CCDC15Q0P6D6 951 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms