RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 SLC35G2Q8TBE7 412 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 C2orf15Q8WU43 125 aaKnown RBP12.03□□□□□ -0.48
SLIRP-212ENST00000613856 KCTD13Q8WZ19 329 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 C18orf8Q96DM3 657 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 MCRS1Q96EZ8 462 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 B3GALT6Q96L58 329 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 ALS2CR12Q96Q35 445 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 NUP85Q9BW27 656 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 ADAM7Q9H2U9 754 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 MFSD1Q9H3U5 465 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 MRPL47Q9HD33 250 aaKnown RBP12.03□□□□□ -0.48
SLIRP-212ENST00000613856 TMLHEQ9NVH6 421 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 LCMT1Q9UIC8 334 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 LZTS1Q9Y250 596 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 NR2E1Q9Y466 385 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 CAPN6Q9Y6Q1 641 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 FANCMQ8IYD8 2048 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 C2orf71A6NGG8 1288 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 E5RJQ4 531 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 TULP2O00295 520 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 ATMINO43313 823 aaPredicted RBP12.02□□□□□ -0.49
SLIRP-212ENST00000613856 MOCS3O95396 460 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 ERBB2P04626 1255 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 URODP06132 367 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 EPCAMP16422 314 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 MAGEA11P43364 429 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 GNG11P61952 73 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 KRT17Q04695 432 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 GPR17Q13304 367 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 ANGPT1Q15389 498 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 SLC39A12Q504Y0 691 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 ZNF569Q5MCW4 686 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 PPP1R15BQ5SWA1 713 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 KIAA1841Q6NSI8 718 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 C11orf63Q6NUN7 778 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 DNAJC24Q6P3W2 148 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 VSTM1Q6UX27 236 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 TMC7Q7Z402 723 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 SPATA2LQ8IUW3 424 aaPredicted RBP12.02□□□□□ -0.49
SLIRP-212ENST00000613856 KIAA2013Q8IYS2 634 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 ZMIZ2Q8NF64 920 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 TPCN2Q8NHX9 752 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 ZNF564Q8TBZ8 553 aaPredicted RBP12.02□□□□□ -0.49
SLIRP-212ENST00000613856 SPPL2BQ8TCT7 592 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 RIN2Q8WYP3 895 aaPredicted RBP12.02□□□□□ -0.49
SLIRP-212ENST00000613856 SMOQ99835 787 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 IRX2Q9BZI1 471 aaPredicted RBP12.02□□□□□ -0.49
SLIRP-212ENST00000613856 ZBP1Q9H171 429 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 SYNCQ9H7C4 482 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 OSGEPQ9NPF4 335 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 DMAP1Q9NPF5 467 aaPredicted RBP12.02□□□□□ -0.49
SLIRP-212ENST00000613856 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.02□□□□□ -0.494e-7■■□□□ 12.6
SLIRP-212ENST00000613856 PARVAQ9NVD7 372 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 CTTNBP2NLQ9P2B4 639 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 SSX2IPQ9Y2D8 614 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 PAXBP1Q9Y5B6 917 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 R4GN57 208 aa12.02□□□□□ -0.49
SLIRP-212ENST00000613856 ZNF638Q14966 1978 aaKnown RBP12.01□□□□□ -0.49
SLIRP-212ENST00000613856 NCOR2Q9Y618 2525 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 ZFHX4Q86UP3 3567 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 GRID2IPA4D2P6 1211 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 MTMR11A4FU01 709 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 BUB1O43683 1085 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 NARSO43776 548 aaKnown RBP12.01□□□□□ -0.49
SLIRP-212ENST00000613856 OR4Q2P0C623 313 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 CTSAP10619 480 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 TNNT1P13805 278 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 CPB1P15086 417 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 HOXB8P17481 243 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-212ENST00000613856 BDNFP23560 247 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 NOP2P46087 812 aaKnown RBP12.01□□□□□ -0.49
SLIRP-212ENST00000613856 RGS7P49802 495 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 CLCN5P51795 746 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 MAMLD1Q13495 774 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 C2CD6Q53TS8 623 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 RAB41Q5JT25 222 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 CYP4A22Q5TCH4 519 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 PDE12Q6L8Q7 609 aaKnown RBP12.01□□□□□ -0.49
SLIRP-212ENST00000613856 PRSS55Q6UWB4 352 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-212ENST00000613856 OLFML1Q6UWY5 402 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 RSPO2Q6UXX9 243 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-212ENST00000613856 SLFN11Q7Z7L1 901 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 PIGZQ86VD9 579 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 CCDC105Q8IYK2 499 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 SYCE1Q8N0S2 351 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 VPS52Q8N1B4 723 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 SCML4Q8N228 414 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 SLC35F6Q8N357 371 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 MRPL43Q8N983 215 aaKnown RBP12.01□□□□□ -0.49
SLIRP-212ENST00000613856 LRRC57Q8N9N7 239 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 TDRD5Q8NAT2 981 aaKnown RBP12.01□□□□□ -0.49
SLIRP-212ENST00000613856 UBE2Q2Q8WVN8 375 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 CASP10Q92851 521 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 WDR24Q96S15 920 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 ST7Q9NRC1 585 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 TMEM30AQ9NV96 361 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 FNIP2Q9P278 1114 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 HSFX1Q9UBD0 423 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 TJP2Q9UDY2 1190 aa12.01□□□□□ -0.49
SLIRP-212ENST00000613856 PCDHB5Q9Y5E4 795 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms