RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 VAV2P52735 878 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 YWHAZP63104 245 aaKnown RBP15.43■□□□□ 0.06
CD48-203ENST00000613788 FAM102AQ5T9C2 384 aaPredicted RBP15.43■□□□□ 0.06
CD48-203ENST00000613788 PLEKHA7Q6IQ23 1121 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 CES5AQ6NT32 575 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 SYCE2Q6PIF2 218 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 PDZD4Q76G19 769 aaPredicted RBP15.43■□□□□ 0.06
CD48-203ENST00000613788 SLC26A9Q7LBE3 791 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 GPR149Q86SP6 731 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 CLEC4CQ8WTT0 213 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 FAM149B1Q96BN6 582 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 GCNAQ96QF7 691 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 DESI2Q9BSY9 194 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 PACSIN1Q9BY11 444 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 CLEC1BQ9P126 229 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 DNMT3BQ9UBC3 853 aaKnown RBP15.43■□□□□ 0.06
CD48-203ENST00000613788 MYO1AQ9UBC5 1043 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 PRRC2BQ5JSZ5 2229 aaKnown RBP15.42■□□□□ 0.06
CD48-203ENST00000613788 SIGLEC16A6NMB1 481 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 YJEFN3A6XGL0 299 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 E7ENQ6 273 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 ZNF197O14709 1029 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 HSF2BPO75031 334 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 LTFP02788 710 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 CYP1A2P05177 515 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 RHOP08100 348 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 KRT3P12035 628 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 MYL4P12829 197 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 GABRR2P28476 465 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 EPHA5P54756 1037 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 YWHAGP61981 247 aaKnown RBP eCLIP15.42■□□□□ 0.06
CD48-203ENST00000613788 CCDC85BQ15834 202 aaPredicted RBP15.42■□□□□ 0.06
CD48-203ENST00000613788 HS1BP3Q53T59 392 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 BSPRYQ5W0U4 402 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 BTBD8Q5XKL5 378 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 ARCQ7LC44 396 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 GRASPQ7Z6J2 395 aaPredicted RBP15.42■□□□□ 0.06
CD48-203ENST00000613788 PHLDB2Q86SQ0 1253 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 TMC8Q8IU68 726 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 HS6ST3Q8IZP7 471 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 NDRG1Q92597 394 aaKnown RBP15.42■□□□□ 0.06
CD48-203ENST00000613788 LRRC3Q9BY71 257 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 ADAM7Q9H2U9 754 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 ZNF334Q9HCZ1 680 aaPredicted RBP15.42■□□□□ 0.06
CD48-203ENST00000613788 ABCC13Q9NSE7 274 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 HCFC1R1Q9NWW0 138 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 CLIC5Q9NZA1 410 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 GMIPQ9P107 970 aa15.42■□□□□ 0.06
CD48-203ENST00000613788 REXO2Q9Y3B8 237 aaKnown RBP15.42■□□□□ 0.06
CD48-203ENST00000613788 A0A1W2PQH9 124 aa15.41■□□□□ 0.06
CD48-203ENST00000613788 CAPN9O14815 690 aa15.41■□□□□ 0.06
CD48-203ENST00000613788 TBX10O75333 385 aa15.41■□□□□ 0.06
CD48-203ENST00000613788 ABL1P00519 1130 aa15.41■□□□□ 0.06
CD48-203ENST00000613788 F11P03951 625 aa15.41■□□□□ 0.06
CD48-203ENST00000613788 ZDHHC11BP0C7U3 371 aa15.41■□□□□ 0.06
CD48-203ENST00000613788 RALAP11233 206 aa15.41■□□□□ 0.06
CD48-203ENST00000613788 LTBRP36941 435 aa15.41■□□□□ 0.06
CD48-203ENST00000613788 RNASE9P60153 205 aaKnown RBP15.41■□□□□ 0.06
CD48-203ENST00000613788 KIF5AQ12840 1032 aa15.41■□□□□ 0.06
CD48-203ENST00000613788 MAMLD1Q13495 774 aa15.41■□□□□ 0.06
CD48-203ENST00000613788 SKIV2LQ15477 1246 aaKnown RBP15.41■□□□□ 0.06
CD48-203ENST00000613788 ATAT1Q5SQI0 421 aa15.41■□□□□ 0.06
CD48-203ENST00000613788 SNX30Q5VWJ9 437 aa15.41■□□□□ 0.06
CD48-203ENST00000613788 DCUN1D2Q6PH85 259 aa15.41■□□□□ 0.06
CD48-203ENST00000613788 BEND5Q7L4P6 421 aa15.41■□□□□ 0.06
CD48-203ENST00000613788 BHLHA9Q7RTU4 235 aa15.41■□□□□ 0.06
CD48-203ENST00000613788 RHOT2Q8IXI1 618 aa15.41■□□□□ 0.06
CD48-203ENST00000613788 IL21Q9HBE4 155 aa15.41■□□□□ 0.06
CD48-203ENST00000613788 POPDC2Q9HBU9 364 aa15.41■□□□□ 0.06
CD48-203ENST00000613788 UVRAGQ9P2Y5 699 aa15.41■□□□□ 0.06
CD48-203ENST00000613788 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.41■□□□□ 0.06
CD48-203ENST00000613788 TCRBV5S1A1TA0A578 114 aa15.4■□□□□ 0.06
CD48-203ENST00000613788 ZNF840PA6NDX5 716 aa15.4■□□□□ 0.06
CD48-203ENST00000613788 PJA2O43164 708 aa15.4■□□□□ 0.06
CD48-203ENST00000613788 ATMINO43313 823 aaPredicted RBP15.4■□□□□ 0.06
CD48-203ENST00000613788 DLX2Q07687 328 aaPredicted RBP15.4■□□□□ 0.06
CD48-203ENST00000613788 GAREM2Q75VX8 874 aa15.4■□□□□ 0.06
CD48-203ENST00000613788 SCD5Q86SK9 330 aa15.4■□□□□ 0.06
CD48-203ENST00000613788 TADA2BQ86TJ2 420 aa15.4■□□□□ 0.06
CD48-203ENST00000613788 ZNF276Q8N554 614 aa15.4■□□□□ 0.06
CD48-203ENST00000613788 FEZF2Q8TBJ5 459 aa15.4■□□□□ 0.06
CD48-203ENST00000613788 PPM1EQ8WY54 764 aa15.4■□□□□ 0.06
CD48-203ENST00000613788 MRPS31Q92665 395 aaKnown RBP15.4■□□□□ 0.06
CD48-203ENST00000613788 KHSRPQ92945 711 aaKnown RBP eCLIP15.4■□□□□ 0.06
CD48-203ENST00000613788 PIWIL1Q96J94 861 aaKnown RBP15.4■□□□□ 0.06
CD48-203ENST00000613788 MSLNLQ96KJ4 702 aa15.4■□□□□ 0.06
CD48-203ENST00000613788 RIPOR3Q96MK2 946 aa15.4■□□□□ 0.06
CD48-203ENST00000613788 CDK5RAP1Q96SZ6 601 aaKnown RBP15.4■□□□□ 0.06
CD48-203ENST00000613788 APOL5Q9BWW9 433 aa15.4■□□□□ 0.06
CD48-203ENST00000613788 S1PR5Q9H228 398 aa15.4■□□□□ 0.06
CD48-203ENST00000613788 ATXN3LQ9H3M9 355 aa15.4■□□□□ 0.06
CD48-203ENST00000613788 NMUR1Q9HB89 426 aa15.4■□□□□ 0.06
CD48-203ENST00000613788 METTL5Q9NRN9 209 aaKnown RBP15.4■□□□□ 0.06
CD48-203ENST00000613788 CTTNBP2NLQ9P2B4 639 aa15.4■□□□□ 0.06
CD48-203ENST00000613788 TMEM59LQ9UK28 342 aa15.4■□□□□ 0.06
CD48-203ENST00000613788 PATJQ8NI35 1801 aa15.4■□□□□ 0.06
CD48-203ENST00000613788 A0A0A6YYK5 440 aaPredicted RBP15.39■□□□□ 0.05
CD48-203ENST00000613788 ZSCAN12O43309 604 aa15.39■□□□□ 0.05
CD48-203ENST00000613788 GRAP2O75791 330 aa15.39■□□□□ 0.05
CD48-203ENST00000613788 NCAM1P13591 858 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms