RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 PRG3Q9Y2Y8 225 aaPredicted RBP17.96■□□□□ 0.47
HMGXB3-206ENST00000613459 PCDHB7Q9Y5E2 793 aa17.96■□□□□ 0.47
HMGXB3-206ENST00000613459 ERCC6L2Q5T890 1561 aa17.96■□□□□ 0.47
HMGXB3-206ENST00000613459 TRIM24O15164 1050 aa17.96■□□□□ 0.47
HMGXB3-206ENST00000613459 CTSHP09668 335 aa17.96■□□□□ 0.47
HMGXB3-206ENST00000613459 ITGALP20701 1170 aa17.96■□□□□ 0.47
HMGXB3-206ENST00000613459 PI4K2AQ9BTU6 479 aa17.96■□□□□ 0.47
HMGXB3-206ENST00000613459 LMTK2Q8IWU2 1503 aa17.96■□□□□ 0.47
HMGXB3-206ENST00000613459 KCNQ2O43526 872 aa17.96■□□□□ 0.46
HMGXB3-206ENST00000613459 MYCP01106 439 aaPredicted RBP17.96■□□□□ 0.46
HMGXB3-206ENST00000613459 ZNF23P17027 643 aa17.96■□□□□ 0.46
HMGXB3-206ENST00000613459 RPL10AP62906 217 aaKnown RBP17.96■□□□□ 0.46
HMGXB3-206ENST00000613459 TBCBQ99426 244 aa17.96■□□□□ 0.46
HMGXB3-206ENST00000613459 FAM118BQ9BPY3 351 aa17.96■□□□□ 0.46
HMGXB3-206ENST00000613459 EHD4Q9H223 541 aa17.96■□□□□ 0.46
HMGXB3-206ENST00000613459 PCDH9Q9HC56 1237 aa17.96■□□□□ 0.46
HMGXB3-206ENST00000613459 RUVBL2Q9Y230 463 aaKnown RBP17.96■□□□□ 0.46
HMGXB3-206ENST00000613459 JCADQ9P266 1359 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 FOXN3O00409 490 aaPredicted RBP17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 HOXC6P09630 235 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 OR1G1P47890 313 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 C1QBPQ07021 282 aaKnown RBP17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 GMCL1P1Q8NEA9 526 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 CASP10Q92851 521 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 VTI1BQ9UEU0 232 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 ENOPH1Q9UHY7 261 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 E2F8A0AVK6 867 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 SGPL1O95470 568 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 CLPTM1O96005 669 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 SUPT20HL2P0C7V6 817 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 ZNF544Q6NX49 715 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 ZDHHC17Q8IUH5 632 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 PAFAH2Q99487 392 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 ZMYND8Q9ULU4 1186 aaPredicted RBP17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 POLR1AO95602 1720 aaPredicted RBP17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 ZMYM2Q9UBW7 1377 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 DNAJB2P25686 324 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 LHX1P48742 406 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 RAD23AP54725 363 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 OVGP1Q12889 678 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 MAD2L1Q13257 205 aaPredicted RBP17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 DENND5BQ6ZUT9 1274 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 ANKRD13AQ8IZ07 590 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 UCMAQ8WVF2 138 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 NUDT12Q9BQG2 462 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 TRIM8Q9BZR9 551 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 UTP6Q9NYH9 597 aaKnown RBP17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 L1RE1Q9UN81 338 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 VCLP18206 1134 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 ST13P50502 369 aaKnown RBP17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 HS6ST3Q8IZP7 471 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 LRRN4CLQ8ND94 238 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 GMCL1Q96IK5 515 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 KLHL25Q9H0H3 589 aa17.95■□□□□ 0.46
HMGXB3-206ENST00000613459 TKTP29401 623 aaKnown RBP17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 SERPINB5P36952 375 aa17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 TAAR1Q96RJ0 339 aa17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 TMEM120AQ9BXJ8 343 aa17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 ACOT9Q9Y305 439 aa17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 AP1G2O75843 785 aa17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 ALDH1A2O94788 518 aa17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 MGAT5Q09328 741 aa17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 LRRC71Q8N4P6 559 aa17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 V9GYQ6 96 aa17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 USP32Q8NFA0 1604 aa17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 IRF1P10914 325 aa17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 OTUD4Q01804 1114 aaKnown RBP17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 OASLQ15646 514 aaKnown RBP17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 CCDC153Q494R4 210 aa17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 VCPIP1Q96JH7 1222 aa17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 KCNMA1Q12791 1236 aa17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 CDKAL1Q5VV42 579 aa17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 GJB7Q6PEY0 223 aa17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 C4orf19Q8IY42 314 aa17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 SLC20A1Q8WUM9 679 aa17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 STN1Q9H668 368 aaKnown RBP17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 POLG2Q9UHN1 485 aa17.94■□□□□ 0.46
HMGXB3-206ENST00000613459 TK2O00142 265 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 PMPCBO75439 489 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 MLH1P40692 756 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 ZNF135P52742 658 aaPredicted RBP17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 OXCT1P55809 520 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 TGM3Q08188 693 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 GIT2Q14161 759 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 CYP51A1Q16850 503 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 SGO1Q5FBB7 561 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 FOXR1Q6PIV2 292 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 KCTD10Q9H3F6 313 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 CDC42EP4Q9H3Q1 356 aaKnown RBP17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 MYOZ2Q9NPC6 264 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 ZNF446Q9NWS9 450 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 ZSCAN32Q9NX65 697 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 LRG1P02750 347 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 MMRN1Q13201 1228 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 NFYCQ13952 458 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 NCF4Q15080 339 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 PDGFCQ9NRA1 345 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 C6orf203Q9P0P8 240 aaPredicted RBP17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 SNX13Q9Y5W8 968 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms