RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 CACNA2D4Q7Z3S7 1137 aa18.34■□□□□ 0.53
PRKN-209ENST00000612485 FAM160A2Q8N612 972 aaPredicted RBP18.34■□□□□ 0.53
PRKN-209ENST00000612485 FBXL13Q8NEE6 735 aa18.34■□□□□ 0.53
PRKN-209ENST00000612485 EEF2KMTQ96G04 330 aa18.34■□□□□ 0.53
PRKN-209ENST00000612485 ZFRQ96KR1 1074 aaKnown RBP18.34■□□□□ 0.53
PRKN-209ENST00000612485 HHIPQ96QV1 700 aa18.34■□□□□ 0.53
PRKN-209ENST00000612485 DUSP9Q99956 384 aaKnown RBP18.34■□□□□ 0.53
PRKN-209ENST00000612485 RAB20Q9NX57 234 aa18.34■□□□□ 0.53
PRKN-209ENST00000612485 SCML2Q9UQR0 700 aa18.34■□□□□ 0.53
PRKN-209ENST00000612485 PCDHA5Q9Y5H7 936 aa18.34■□□□□ 0.53
PRKN-209ENST00000612485 DNAH14Q0VDD8 3507 aa18.33■□□□□ 0.53
PRKN-209ENST00000612485 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.33■□□□□ 0.52
PRKN-209ENST00000612485 K7EQS6 105 aa18.33■□□□□ 0.52
PRKN-209ENST00000612485 AXIN1O15169 862 aa18.33■□□□□ 0.52
PRKN-209ENST00000612485 APBB3O95704 486 aa18.33■□□□□ 0.52
PRKN-209ENST00000612485 ADH5P11766 374 aa18.33■□□□□ 0.52
PRKN-209ENST00000612485 FKBP3Q00688 224 aaKnown RBP18.33■□□□□ 0.52
PRKN-209ENST00000612485 RHBDF2Q6PJF5 856 aa18.33■□□□□ 0.52
PRKN-209ENST00000612485 SPATA20Q8TB22 786 aa18.33■□□□□ 0.52
PRKN-209ENST00000612485 USP33Q8TEY7 942 aa18.33■□□□□ 0.52
PRKN-209ENST00000612485 WHAMMQ8TF30 809 aa18.33■□□□□ 0.52
PRKN-209ENST00000612485 SEMA4DQ92854 862 aa18.33■□□□□ 0.52
PRKN-209ENST00000612485 JAKMIP2Q96AA8 810 aa18.33■□□□□ 0.52
PRKN-209ENST00000612485 PNKPQ96T60 521 aa18.33■□□□□ 0.52
PRKN-209ENST00000612485 FAM124BQ9H5Z6 455 aaPredicted RBP18.33■□□□□ 0.52
PRKN-209ENST00000612485 POLR3BQ9NW08 1133 aaPredicted RBP18.33■□□□□ 0.52
PRKN-209ENST00000612485 ATG2BQ96BY7 2078 aa18.33■□□□□ 0.52
PRKN-209ENST00000612485 MYH10P35580 1976 aa18.32■□□□□ 0.52
PRKN-209ENST00000612485 FOXD2O60548 495 aaPredicted RBP18.32■□□□□ 0.52
PRKN-209ENST00000612485 APODP05090 189 aa18.32■□□□□ 0.52
PRKN-209ENST00000612485 ACO1P21399 889 aaKnown RBP18.32■□□□□ 0.52
PRKN-209ENST00000612485 SEC13P55735 322 aa18.32■□□□□ 0.52
PRKN-209ENST00000612485 GAD2Q05329 585 aa18.32■□□□□ 0.52
PRKN-209ENST00000612485 LRRC63Q05C16 580 aa18.32■□□□□ 0.52
PRKN-209ENST00000612485 GOLGA8FQ08AF8 430 aa18.32■□□□□ 0.52
PRKN-209ENST00000612485 GOLGA8DPQ0D2H9 430 aa18.32■□□□□ 0.52
PRKN-209ENST00000612485 DCAF17Q5H9S7 520 aaPredicted RBP18.32■□□□□ 0.52
PRKN-209ENST00000612485 TCERG1LQ5VWI1 586 aa18.32■□□□□ 0.52
PRKN-209ENST00000612485 GPRIN1Q7Z2K8 1008 aa18.32■□□□□ 0.52
PRKN-209ENST00000612485 ZC3H3Q8IXZ2 948 aaKnown RBP18.32■□□□□ 0.52
PRKN-209ENST00000612485 LOXL4Q96JB6 756 aa18.32■□□□□ 0.52
PRKN-209ENST00000612485 DUSP16Q9BY84 665 aa18.32■□□□□ 0.52
PRKN-209ENST00000612485 CYLDQ9NQC7 956 aa18.32■□□□□ 0.52
PRKN-209ENST00000612485 SEMA4GQ9NTN9 838 aa18.32■□□□□ 0.52
PRKN-209ENST00000612485 EBF1Q9UH73 591 aa18.32■□□□□ 0.52
PRKN-209ENST00000612485 CDV3Q9UKY7 258 aaKnown RBP18.32■□□□□ 0.52
PRKN-209ENST00000612485 CEP250Q9BV73 2442 aa18.31■□□□□ 0.52
PRKN-209ENST00000612485 HHLA1C9JL84 531 aa18.31■□□□□ 0.52
PRKN-209ENST00000612485 IRF1P10914 325 aa18.31■□□□□ 0.52
PRKN-209ENST00000612485 ATP5C1P36542 298 aaKnown RBP18.31■□□□□ 0.52
PRKN-209ENST00000612485 SLC6A11P48066 632 aa18.31■□□□□ 0.52
PRKN-209ENST00000612485 MRPS21P82921 87 aaKnown RBP18.31■□□□□ 0.52
PRKN-209ENST00000612485 STIM1Q13586 685 aa18.31■□□□□ 0.52
PRKN-209ENST00000612485 CSRP2Q16527 193 aa18.31■□□□□ 0.52
PRKN-209ENST00000612485 PREPLQ4J6C6 727 aaPredicted RBP18.31■□□□□ 0.52
PRKN-209ENST00000612485 ZNF394Q53GI3 561 aa18.31■□□□□ 0.52
PRKN-209ENST00000612485 C2orf27AQ580R0 203 aa18.31■□□□□ 0.52
PRKN-209ENST00000612485 LY6G5CQ5SRR4 150 aa18.31■□□□□ 0.52
PRKN-209ENST00000612485 PPP1R26Q5T8A7 1209 aaPredicted RBP18.31■□□□□ 0.52
PRKN-209ENST00000612485 BTBD8Q5XKL5 378 aa18.31■□□□□ 0.52
PRKN-209ENST00000612485 ANKRD40Q6AI12 368 aa18.31■□□□□ 0.52
PRKN-209ENST00000612485 BBS7Q8IWZ6 715 aa18.31■□□□□ 0.52
PRKN-209ENST00000612485 ELOA2Q8IYF1 753 aaPredicted RBP18.31■□□□□ 0.52
PRKN-209ENST00000612485 TSTD1Q8NFU3 115 aa18.31■□□□□ 0.52
PRKN-209ENST00000612485 HEXIM2Q96MH2 286 aaKnown RBP18.31■□□□□ 0.52
PRKN-209ENST00000612485 ARHGEF4Q9NR80 690 aa18.31■□□□□ 0.52
PRKN-209ENST00000612485 CISHQ9NSE2 258 aa18.31■□□□□ 0.52
PRKN-209ENST00000612485 CYP26A1O43174 497 aa18.3■□□□□ 0.52
PRKN-209ENST00000612485 KAT7O95251 611 aa18.3■□□□□ 0.52
PRKN-209ENST00000612485 PPP1R2P41236 205 aa18.3■□□□□ 0.52
PRKN-209ENST00000612485 GRIA2P42262 883 aa18.3■□□□□ 0.52
PRKN-209ENST00000612485 PGFP49763 221 aa18.3■□□□□ 0.52
PRKN-209ENST00000612485 PSEN1P49768 467 aa18.3■□□□□ 0.52
PRKN-209ENST00000612485 KIF11P52732 1056 aa18.3■□□□□ 0.52
PRKN-209ENST00000612485 HSF5Q4G112 596 aaPredicted RBP18.3■□□□□ 0.52
PRKN-209ENST00000612485 TADA2BQ86TJ2 420 aa18.3■□□□□ 0.52
PRKN-209ENST00000612485 C12orf40Q86WS4 652 aa18.3■□□□□ 0.52
PRKN-209ENST00000612485 ERCC4Q92889 916 aaPredicted RBP18.3■□□□□ 0.52
PRKN-209ENST00000612485 TMEM176AQ96HP8 235 aa18.3■□□□□ 0.52
PRKN-209ENST00000612485 KLF16Q9BXK1 252 aaPredicted RBP18.3■□□□□ 0.52
PRKN-209ENST00000612485 SPHK2Q9NRA0 654 aa18.3■□□□□ 0.52
PRKN-209ENST00000612485 ARMCX3Q9UH62 379 aaPredicted RBP18.3■□□□□ 0.52
PRKN-209ENST00000612485 LSM7Q9UK45 103 aaKnown RBP18.3■□□□□ 0.52
PRKN-209ENST00000612485 MMP17Q9ULZ9 603 aa18.3■□□□□ 0.52
PRKN-209ENST00000612485 MYO16Q9Y6X6 1858 aa18.29■□□□□ 0.52
PRKN-209ENST00000612485 KIAA1549LQ6ZVL6 1849 aa18.29■□□□□ 0.52
PRKN-209ENST00000612485 A0A0A0MRY4 1105 aa18.29■□□□□ 0.52
PRKN-209ENST00000612485 A0A1W2PQH9 124 aa18.29■□□□□ 0.52
PRKN-209ENST00000612485 PSMA7O14818 248 aa18.29■□□□□ 0.52
PRKN-209ENST00000612485 HOXC11O43248 304 aaPredicted RBP18.29■□□□□ 0.52
PRKN-209ENST00000612485 EPN2O95208 641 aa18.29■□□□□ 0.52
PRKN-209ENST00000612485 TBX18O95935 607 aa18.29■□□□□ 0.52
PRKN-209ENST00000612485 RARGP13631 454 aa18.29■□□□□ 0.52
PRKN-209ENST00000612485 TNFRSF4P43489 277 aa18.29■□□□□ 0.52
PRKN-209ENST00000612485 DGKEP52429 567 aa18.29■□□□□ 0.52
PRKN-209ENST00000612485 PMS1P54277 932 aaKnown RBP18.29■□□□□ 0.52
PRKN-209ENST00000612485 CBWD6Q4V339 395 aa18.29■□□□□ 0.52
PRKN-209ENST00000612485 CBWD3Q5JTY5 395 aa18.29■□□□□ 0.52
PRKN-209ENST00000612485 CBWD5Q5RIA9 395 aa18.29■□□□□ 0.52
PRKN-209ENST00000612485 KLHDC10Q6PID8 442 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms