RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 TEX35Q5T0J7 233 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 CCDC181Q5TID7 509 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 ZNF280DQ6N043 979 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 RSPO2Q6UXX9 243 aaPredicted RBP8.49□□□□□ -1.05
TARDBP-213ENST00000611963 SPATA2LQ8IUW3 424 aaPredicted RBP8.49□□□□□ -1.05
TARDBP-213ENST00000611963 CMTR2Q8IYT2 770 aaKnown RBP8.49□□□□□ -1.05
TARDBP-213ENST00000611963 DCP1BQ8IZD4 617 aaKnown RBP8.49□□□□□ -1.05
TARDBP-213ENST00000611963 TTC9BQ8N6N2 239 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 UBL4BQ8N7F7 174 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 CEP112Q8N8E3 955 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 COLGALT1Q8NBJ5 622 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 RXFP2Q8WXD0 754 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 IGSF21Q96ID5 467 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 PBKQ96KB5 322 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 ZNF558Q96NG5 402 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 PGLYRP2Q96PD5 576 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 GAS2L1Q99501 681 aaPredicted RBP8.49□□□□□ -1.05
TARDBP-213ENST00000611963 ULBP1Q9BZM6 244 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 RAB6CQ9H0N0 254 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 LRRC4Q9HBW1 653 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 CYLDQ9NQC7 956 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 PRDM6Q9NQX0 595 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 KLHL11Q9NVR0 708 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 ABI2Q9NYB9 513 aaPredicted RBP8.49□□□□□ -1.05
TARDBP-213ENST00000611963 TMEM59LQ9UK28 342 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 VCANP13611 3396 aa8.49□□□□□ -1.05
TARDBP-213ENST00000611963 CCDC66A2RUB6 948 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 CTAGE15A4D2H0 777 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 LINC01553A4QN01 128 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 OR6C75A6NL08 312 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 ADAM12O43184 909 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 LPXNO60711 386 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 CTAGE8P0CG41 777 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 PDGFRAP16234 1089 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 RPL17P18621 184 aaKnown RBP8.48□□□□□ -1.05
TARDBP-213ENST00000611963 LAG3P18627 525 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 GPD1P21695 349 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 IGFBP4P22692 258 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 SLC1A1P43005 524 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 PAFAH1B1P43034 410 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 GPR15P49685 360 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 PEX5P50542 639 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 TKTL1P51854 596 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 SNX16P57768 344 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 HTRA4P83105 476 aaPredicted RBP8.48□□□□□ -1.05
TARDBP-213ENST00000611963 PIGHQ14442 188 aaPredicted RBP8.48□□□□□ -1.05
TARDBP-213ENST00000611963 LLGL1Q15334 1064 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 MAPRE1Q15691 268 aaKnown RBP8.48□□□□□ -1.05
TARDBP-213ENST00000611963 CDO1Q16878 200 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 C15orf59Q2T9L4 293 aaPredicted RBP8.48□□□□□ -1.05
TARDBP-213ENST00000611963 SH3PXD2AQ5TCZ1 1133 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 SDHAF4Q5VUM1 108 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 TXNRD3NBQ6F5E7 133 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 CC2D1AQ6P1N0 951 aaPredicted RBP8.48□□□□□ -1.05
TARDBP-213ENST00000611963 C4orf50Q6ZRC1 276 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 HFE2Q6ZVN8 426 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 SLC26A9Q7LBE3 791 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 CTAGE6Q86UF2 777 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 SCN4BQ8IWT1 228 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 CTAGE4Q8IX94 777 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 SIX6OS1Q8N1H7 587 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 SLC39A11Q8N1S5 342 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 ARFGAP1Q8N6T3 406 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 NIPA2Q8N8Q9 360 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 ATAD1Q8NBU5 361 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 NOA1Q8NC60 698 aaKnown RBP8.48□□□□□ -1.05
TARDBP-213ENST00000611963 STKLD1Q8NE28 680 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.48□□□□□ -1.05
TARDBP-213ENST00000611963 FNIP1Q8TF40 1166 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 ARNTL2Q8WYA1 636 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 RIN2Q8WYP3 895 aaPredicted RBP8.48□□□□□ -1.05
TARDBP-213ENST00000611963 KCTD13Q8WZ19 329 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 FAM149B1Q96BN6 582 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 ACSF2Q96CM8 615 aaPredicted RBP8.48□□□□□ -1.05
TARDBP-213ENST00000611963 RAD9AQ99638 391 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 TTPALQ9BTX7 342 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 DMAP1Q9NPF5 467 aaPredicted RBP8.48□□□□□ -1.05
TARDBP-213ENST00000611963 PLA2G2EQ9NZK7 142 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 PCDHA3Q9Y5H8 950 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 REV3LO60673 3130 aa8.48□□□□□ -1.05
TARDBP-213ENST00000611963 COL4A4P53420 1690 aaPredicted RBP8.47□□□□□ -1.05
TARDBP-213ENST00000611963 ANAPC1Q9H1A4 1944 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 MTMR11A4FU01 709 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 PI4K2BG5E9Z4 385 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 H7C4K7 107 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 PGRMC1O00264 195 aaKnown RBP8.47□□□□□ -1.05
TARDBP-213ENST00000611963 CES2O00748 559 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 C2CD2LO14523 706 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 CTIFO43310 598 aaKnown RBP8.47□□□□□ -1.05
TARDBP-213ENST00000611963 PSTPIP1O43586 416 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 TBC1D4O60343 1298 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 LRCH4O75427 683 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 SOAT2O75908 522 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 VNN2O95498 520 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 EFEMP2O95967 443 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 USP17L7P0C7H9 530 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 PYGMP11217 842 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 CPB1P15086 417 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 TFE3P19532 575 aaPredicted RBP8.47□□□□□ -1.05
TARDBP-213ENST00000611963 POU3F3P20264 500 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms