RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 PTPRN2Q92932 1015 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 RMDN1Q96DB5 314 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 GBP5Q96PP8 586 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 GAD1Q99259 594 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 MAGEB5Q9BZ81 275 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 APOBEC3GQ9HC16 384 aaKnown RBP13.63□□□□□ -0.23
TCF3-220ENST00000611869 KCNK1O00180 336 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 NEMP1O14524 444 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 PYGBP11216 843 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 TARSP26639 723 aaKnown RBP13.63□□□□□ -0.23
TCF3-220ENST00000611869 SCTRP47872 440 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 YWHAZP63104 245 aaKnown RBP13.63□□□□□ -0.23
TCF3-220ENST00000611869 GPR142Q7Z601 462 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 ZCCHC9Q8N567 271 aaKnown RBP13.63□□□□□ -0.23
TCF3-220ENST00000611869 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.63□□□□□ -0.234e-7■■■■■ 39.7
TCF3-220ENST00000611869 C12orf42Q96LP6 360 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 UBP1Q9NZI7 540 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 SLC24A2Q9UI40 661 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 CCDC88AQ3V6T2 1871 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 AGPSO00116 658 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 UBOX5O94941 541 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 LUC7L3O95232 432 aaKnown RBP13.62□□□□□ -0.23
TCF3-220ENST00000611869 ICAM3P32942 547 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 FSCBQ5H9T9 825 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 TTC27Q6P3X3 843 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 FAM183BPQ6ZVS7 135 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 ART4Q93070 314 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 TBCBQ99426 244 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 TSR3Q9UJK0 312 aaKnown RBP13.62□□□□□ -0.23
TCF3-220ENST00000611869 GRID1Q9ULK0 1009 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 GOLGA8QA0A0J9YX86 632 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 GOLGA8OA6NCC3 632 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 TMEM191CA6NGB0 347 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 GOLGA8NF8WBI6 632 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 BANF1O75531 89 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 GRAMD1BQ3KR37 738 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 C4orf22Q6V702 233 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 MIB1Q86YT6 1006 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 PLEKHO2Q8TD55 490 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 TASP1Q9H6P5 420 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 PRDM4Q9UKN5 801 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 SLC39A10Q9ULF5 831 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 TJP1Q07157 1748 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 RPTORQ8N122 1335 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 GOLGA8CPA6NN73 597 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 JCHAINP01591 159 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 S100BP04271 92 aaPredicted RBP13.62□□□□□ -0.23
TCF3-220ENST00000611869 FDFT1P37268 417 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 PEX19P40855 299 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 RAD23BP54727 409 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 FCGRTP55899 365 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 NSUN2Q08J23 767 aaKnown RBP eCLIP13.62□□□□□ -0.233e-15■■■■■ 184.8
TCF3-220ENST00000611869 LRRC38Q5VT99 294 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 FAM117BQ6P1L5 589 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 KCNT2Q6UVM3 1135 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 SLC26A11Q86WA9 606 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 NT5DC4Q86YG4 428 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 PPHLN1Q8NEY8 458 aaKnown RBP13.62□□□□□ -0.23
TCF3-220ENST00000611869 LRGUKQ96M69 825 aa13.62□□□□□ -0.23
TCF3-220ENST00000611869 MARF1Q9Y4F3 1742 aaKnown RBP13.62□□□□□ -0.23
TCF3-220ENST00000611869 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.61□□□□□ -0.23
TCF3-220ENST00000611869 SDR42E2A6NKP2 422 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 MAP3K7O43318 606 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 SKIP12755 728 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 TGM2P21980 687 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 HNRNPH1P31943 449 aaKnown RBP13.61□□□□□ -0.23
TCF3-220ENST00000611869 PGM1P36871 562 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 LONP2Q86WA8 852 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 COLGALT1Q8NBJ5 622 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 DTX3LQ8TDB6 740 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 FAM96AQ9H5X1 160 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 MYH10P35580 1976 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 GPR25O00155 361 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 XPAP23025 273 aaPredicted RBP13.61□□□□□ -0.23
TCF3-220ENST00000611869 ETFBP38117 255 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 FSCN1Q16658 493 aaKnown RBP13.61□□□□□ -0.23
TCF3-220ENST00000611869 CXCL17Q6UXB2 119 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 NLRP9Q7RTR0 991 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 ZNF512Q96ME7 567 aaPredicted RBP13.61□□□□□ -0.23
TCF3-220ENST00000611869 CPXM1Q96SM3 734 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 STOML1Q9UBI4 398 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 COQ4Q9Y3A0 265 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 hCG_1818297A0A087WSY0 165 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 DPYSL3Q14195 570 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 RBBP5Q15291 538 aaKnown RBP13.61□□□□□ -0.23
TCF3-220ENST00000611869 DCP1BQ8IZD4 617 aaKnown RBP13.61□□□□□ -0.23
TCF3-220ENST00000611869 CELF6Q96J87 481 aaKnown RBP13.61□□□□□ -0.23
TCF3-220ENST00000611869 ANGPTL2Q9UKU9 493 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 SIPA1L3O60292 1781 aaPredicted RBP13.61□□□□□ -0.23
TCF3-220ENST00000611869 SMIM10L2AP0DMW4 78 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 SMIM10L2BP0DMW5 78 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 RPL22P35268 128 aaKnown RBP13.61□□□□□ -0.23
TCF3-220ENST00000611869 KIF19Q2TAC6 998 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 PLEKHA7Q6IQ23 1121 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 ZNF516Q92618 1163 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 CATSPERBQ9H7T0 1116 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 EPS15L1Q9UBC2 864 aa13.61□□□□□ -0.23
TCF3-220ENST00000611869 FZD9O00144 591 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 MTSS1O43312 755 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 NUDT17P0C025 328 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms