RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 NR2F2P24468 414 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 RPL13P26373 211 aaKnown RBP8.06□□□□□ -1.12
CUX1-219ENST00000606749 TIE1P35590 1138 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 PSMC2P35998 433 aaKnown RBP8.06□□□□□ -1.12
CUX1-219ENST00000606749 GRIA2P42262 883 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 PIK3CAP42336 1068 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 TNFRSF4P43489 277 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 KIR2DL1P43626 348 aaPredicted RBP8.06□□□□□ -1.12
CUX1-219ENST00000606749 GCLMP48507 274 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 LIMK1P53667 647 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 GAD2Q05329 585 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 ENPEPQ07075 957 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 PPP3CAQ08209 521 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 INCA1Q0VD86 236 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 ADAM9Q13443 819 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 CRY1Q16526 586 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 AASDHQ4L235 1098 aaPredicted RBP8.06□□□□□ -1.12
CUX1-219ENST00000606749 USP39Q53GS9 565 aaKnown RBP8.06□□□□□ -1.12
CUX1-219ENST00000606749 TMEM92Q6UXU6 159 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 KRBA2Q6ZNG9 492 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 INTS8Q75QN2 995 aaKnown RBP8.06□□□□□ -1.12
CUX1-219ENST00000606749 RASSF3Q86WH2 238 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 TMEM25Q86YD3 366 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 PHTF2Q8N3S3 785 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 GUF1Q8N442 669 aaKnown RBP8.06□□□□□ -1.12
CUX1-219ENST00000606749 C12orf50Q8NA57 414 aaPredicted RBP8.06□□□□□ -1.12
CUX1-219ENST00000606749 IL17RCQ8NAC3 791 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 TXNDC5Q8NBS9 432 aaKnown RBP8.06□□□□□ -1.12
CUX1-219ENST00000606749 TSTD1Q8NFU3 115 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 TAS1R2Q8TE23 839 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 WHAMMQ8TF30 809 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 WBP2Q969T9 261 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 CYFIP2Q96F07 1278 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 TWNKQ96RR1 684 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 DUSP9Q99956 384 aaKnown RBP8.06□□□□□ -1.12
CUX1-219ENST00000606749 KLF16Q9BXK1 252 aaPredicted RBP8.06□□□□□ -1.12
CUX1-219ENST00000606749 GOLPH3LQ9H4A5 285 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 SMOC1Q9H4F8 434 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 CYP3A43Q9HB55 503 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 APOBEC3GQ9HC16 384 aaKnown RBP8.06□□□□□ -1.12
CUX1-219ENST00000606749 TLR8Q9NR97 1041 aaKnown RBP8.06□□□□□ -1.12
CUX1-219ENST00000606749 FAM49BQ9NUQ9 324 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 MMP17Q9ULZ9 603 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 SCML2Q9UQR0 700 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 SH3BP1Q9Y3L3 701 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 LAMA1P25391 3075 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 MYOFQ9NZM1 2061 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 CACNA1AO00555 2505 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 EML5Q05BV3 1969 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 BCLAF3A2AJT9 711 aaKnown RBP8.05□□□□□ -1.12
CUX1-219ENST00000606749 HOXC11O43248 304 aaPredicted RBP8.05□□□□□ -1.12
CUX1-219ENST00000606749 GREM1O60565 184 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 TLR5O60602 858 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 KLF8O95600 359 aaPredicted RBP8.05□□□□□ -1.12
CUX1-219ENST00000606749 CAVIN2O95810 425 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 FAM200BP0CF97 657 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 KRT13P13646 458 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 ADORA2BP29275 332 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 GTF2H1P32780 548 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 ATP5C1P36542 298 aaKnown RBP8.05□□□□□ -1.12
CUX1-219ENST00000606749 MPLP40238 635 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 C1QBPQ07021 282 aaKnown RBP8.05□□□□□ -1.12
CUX1-219ENST00000606749 ELF2Q15723 593 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 HSF5Q4G112 596 aaPredicted RBP8.05□□□□□ -1.12
CUX1-219ENST00000606749 ZCWPW2Q504Y3 356 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 PPM1JQ5JR12 505 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 STPG1Q5TH74 334 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 BTBD8Q5XKL5 378 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 ANO7Q6IWH7 933 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 CLEC20AQ6ZU45 233 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 HTR3DQ70Z44 454 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 GPRIN1Q7Z2K8 1008 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 BBS7Q8IWZ6 715 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 ETFBKMTQ8IXQ9 262 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 FAM186BQ8IYM0 893 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 ALLCQ8N6M5 410 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 NAT16Q8N8M0 369 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 MDGA1Q8NFP4 955 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 KCNV2Q8TDN2 545 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 DDX1Q92499 740 aaKnown RBP8.05□□□□□ -1.12
CUX1-219ENST00000606749 SEMA4DQ92854 862 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 CNOT6LQ96LI5 555 aaKnown RBP8.05□□□□□ -1.12
CUX1-219ENST00000606749 NT5C1AQ9BXI3 368 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 TPSD1Q9BZJ3 242 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 IMPG2Q9BZV3 1241 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 NACA2Q9H009 215 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 TMEM8AQ9HCN3 771 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 CYLDQ9NQC7 956 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 ARHGEF4Q9NR80 690 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 SPHK2Q9NRA0 654 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 VPS45Q9NRW7 570 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 OSER1Q9NX31 292 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 ATP6V1DQ9Y5K8 247 aa8.05□□□□□ -1.12
CUX1-219ENST00000606749 MYO16Q9Y6X6 1858 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 TBC1D3BA6NDS4 549 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.04□□□□□ -1.12
CUX1-219ENST00000606749 SGK1O00141 431 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 CYP26A1O43174 497 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 ADAM23O75077 832 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 CILPO75339 1184 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms