RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 FAM102BQ5T8I3 360 aa12.92□□□□□ -0.34
CDCA3-212ENST00000604599 ENOSF1Q7L5Y1 443 aa12.92□□□□□ -0.34
CDCA3-212ENST00000604599 ABRAQ8N0Z2 381 aa12.92□□□□□ -0.34
CDCA3-212ENST00000604599 NUP93Q8N1F7 819 aa12.92□□□□□ -0.34
CDCA3-212ENST00000604599 ACTRT2Q8TDY3 377 aa12.92□□□□□ -0.34
CDCA3-212ENST00000604599 XPNPEP1Q9NQW7 623 aa12.92□□□□□ -0.34
CDCA3-212ENST00000604599 DNAJC16Q9Y2G8 782 aa12.92□□□□□ -0.34
CDCA3-212ENST00000604599 PCDHB4Q9Y5E5 795 aa12.92□□□□□ -0.34
CDCA3-212ENST00000604599 A0A0B4J269 797 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 DENRO43583 198 aaKnown RBP12.91□□□□□ -0.34
CDCA3-212ENST00000604599 KRT37O76014 449 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 SNRPAP09012 282 aaKnown RBP12.91□□□□□ -0.34
CDCA3-212ENST00000604599 TUBB3Q13509 450 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 C6orf52Q5T4I8 152 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 AMIGO2Q86SJ2 522 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 ZNF410Q86VK4 478 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 RTKN2Q8IZC4 609 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 PQLC1Q8N2U9 271 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 CCDC33Q8N5R6 958 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 RIN3Q8TB24 985 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 FNDC8Q8TC99 324 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 ZNF778Q96MU6 729 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 Q9H521 79 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 FAF1Q9UNN5 650 aaPredicted RBP12.91□□□□□ -0.34
CDCA3-212ENST00000604599 TMEM191CA6NGB0 347 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 TMEM221A6NGB7 291 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 ITM2AO43736 263 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 PEX1O43933 1283 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 SNNO75324 88 aaPredicted RBP12.91□□□□□ -0.34
CDCA3-212ENST00000604599 TMEM191BP0C7N4 346 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 MAPTP10636 758 aaKnown RBP12.91□□□□□ -0.34
CDCA3-212ENST00000604599 ITGAXP20702 1163 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 WASHC5Q12768 1159 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 FRMD7Q6ZUT3 714 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 KBTBD6Q86V97 674 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 WDR75Q8IWA0 830 aaKnown RBP12.91□□□□□ -0.34
CDCA3-212ENST00000604599 NDUFAF2Q8N183 169 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 TMEM174Q8WUU8 243 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 CCDC17Q96LX7 622 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 FAM213AQ9BRX8 229 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 IFT122Q9HBG6 1241 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 NYAP2Q9P242 653 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 NARFQ9UHQ1 456 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 TBX20Q9UMR3 447 aa12.91□□□□□ -0.34
CDCA3-212ENST00000604599 APOBEC2Q9Y235 224 aaKnown RBP12.91□□□□□ -0.34
CDCA3-212ENST00000604599 RFPL1O75677 317 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 CDH2P19022 906 aaPredicted RBP12.9□□□□□ -0.34
CDCA3-212ENST00000604599 NCF2P19878 526 aaPredicted RBP12.9□□□□□ -0.34
CDCA3-212ENST00000604599 EIF4BP23588 611 aaKnown RBP12.9□□□□□ -0.34
CDCA3-212ENST00000604599 RPL26P61254 145 aaKnown RBP12.9□□□□□ -0.34
CDCA3-212ENST00000604599 PDK1Q15118 436 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 WDR44Q5JSH3 913 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 CDC42EP5Q6NZY7 148 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 POLNQ7Z5Q5 900 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 PHF13Q86YI8 300 aaPredicted RBP12.9□□□□□ -0.34
CDCA3-212ENST00000604599 MAML3Q96JK9 1138 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 CSRNP1Q96S65 589 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 AK5Q9Y6K8 562 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 BPGMP07738 259 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 CD48P09326 243 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 MROH9Q5TGP6 573 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 VWA5B1Q5TIE3 1220 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 PLA2G4FQ68DD2 849 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 DNAJC24Q6P3W2 148 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 SLC39A4Q6P5W5 647 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 C15orf52Q6ZUT6 534 aaKnown RBP12.9□□□□□ -0.34
CDCA3-212ENST00000604599 FBXW8Q8N3Y1 598 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 GALNT4Q8N4A0 578 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 TMC2Q8TDI7 906 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 ZNF516Q92618 1163 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 PRR12Q9ULL5 1215 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 TEX264Q9Y6I9 313 aa12.9□□□□□ -0.34
CDCA3-212ENST00000604599 ZNF335Q9H4Z2 1342 aaPredicted RBP12.9□□□□□ -0.34
CDCA3-212ENST00000604599 RIMBP2O15034 1052 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 HDAC4P56524 1084 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 MRPS22P82650 360 aaKnown RBP12.89□□□□□ -0.35
CDCA3-212ENST00000604599 C1QBPQ07021 282 aaKnown RBP12.89□□□□□ -0.35
CDCA3-212ENST00000604599 CYTH1Q15438 398 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 LOXHD1Q8IVV2 1947 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 AHI1Q8N157 1196 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 PIWIL2Q8TC59 973 aaKnown RBP12.89□□□□□ -0.35
CDCA3-212ENST00000604599 TFB1MQ8WVM0 346 aaKnown RBP12.89□□□□□ -0.35
CDCA3-212ENST00000604599 TRIM56Q9BRZ2 755 aaKnown RBP12.89□□□□□ -0.35
CDCA3-212ENST00000604599 POLLQ9UGP5 575 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 ITGA11Q9UKX5 1188 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 TTLL3Q9Y4R7 772 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 COL5A3P25940 1745 aaPredicted RBP12.89□□□□□ -0.35
CDCA3-212ENST00000604599 KLHL2O95198 593 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 HLA-DRAP01903 254 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 TNNI1P19237 187 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 MSX2P35548 267 aaPredicted RBP12.89□□□□□ -0.35
CDCA3-212ENST00000604599 STT3AP46977 705 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 ATXN3P54252 364 aaPredicted RBP12.89□□□□□ -0.35
CDCA3-212ENST00000604599 RPL10AP62906 217 aaKnown RBP12.89□□□□□ -0.35
CDCA3-212ENST00000604599 AOC3Q16853 763 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 ANGEL2Q5VTE6 544 aaKnown RBP12.89□□□□□ -0.35
CDCA3-212ENST00000604599 B3GNT9Q6UX72 402 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 LRRC43Q8N309 656 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 PHTF2Q8N3S3 785 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 PPP1R14BQ96C90 147 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms