RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 ZNF840PA6NDX5 716 aa21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 SOWAHDA6NJG2 315 aa21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 YJEFN3A6XGL0 299 aa21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 E7ENQ6 273 aa21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 AKR1B10O60218 316 aa21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 GZMAP12544 262 aa21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 CDC25CP30307 473 aa21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 CBX2Q14781 532 aaPredicted RBP21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 MTF1Q14872 753 aa21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 SLC18A3Q16572 532 aa21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 STXBP5Q5T5C0 1151 aa21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 OR6B2Q6IFH4 312 aa21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 OLFML1Q6UWY5 402 aa21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 RAD9BQ6WBX8 426 aa21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 GET4Q7L5D6 327 aaPredicted RBP21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 MCOLN2Q8IZK6 566 aa21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 OVCA2Q8WZ82 227 aa21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 CCDC42Q96M95 316 aa21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 BAG1Q99933 345 aaPredicted RBP21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 TRPM5Q9NZQ8 1165 aa21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 ADAM22Q9P0K1 906 aa21.02■□□□□ 0.96
SHKBP1-222ENST00000600320 ZNF197O14709 1029 aa21.01■□□□□ 0.95
SHKBP1-222ENST00000600320 ZNF263O14978 683 aa21.01■□□□□ 0.95
SHKBP1-222ENST00000600320 RTN2O75298 545 aa21.01■□□□□ 0.95
SHKBP1-222ENST00000600320 FBXO21O94952 628 aa21.01■□□□□ 0.95
SHKBP1-222ENST00000600320 FTLP02792 175 aaPredicted RBP21.01■□□□□ 0.95
SHKBP1-222ENST00000600320 TAF5Q15542 800 aa21.01■□□□□ 0.95
SHKBP1-222ENST00000600320 CCDC122Q5T0U0 273 aa21.01■□□□□ 0.95
SHKBP1-222ENST00000600320 ALKBH5Q6P6C2 394 aaKnown RBP21.01■□□□□ 0.95
SHKBP1-222ENST00000600320 PDZD8Q8NEN9 1154 aa21.01■□□□□ 0.95
SHKBP1-222ENST00000600320 IRGQQ8WZA9 623 aa21.01■□□□□ 0.95
SHKBP1-222ENST00000600320 KHSRPQ92945 711 aaKnown RBP eCLIP21.01■□□□□ 0.95
SHKBP1-222ENST00000600320 NECTIN4Q96NY8 510 aa21.01■□□□□ 0.95
SHKBP1-222ENST00000600320 GCNAQ96QF7 691 aa21.01■□□□□ 0.95
SHKBP1-222ENST00000600320 ISCUQ9H1K1 167 aa21.01■□□□□ 0.95
SHKBP1-222ENST00000600320 ANAPC1Q9H1A4 1944 aa21.01■□□□□ 0.95
SHKBP1-222ENST00000600320 REV3LO60673 3130 aa21.01■□□□□ 0.95
SHKBP1-222ENST00000600320 DENND4CQ5VZ89 1909 aa21■□□□□ 0.95
SHKBP1-222ENST00000600320 FGF19O95750 216 aa21■□□□□ 0.95
SHKBP1-222ENST00000600320 ABL1P00519 1130 aa21■□□□□ 0.95
SHKBP1-222ENST00000600320 YWHAGP61981 247 aaKnown RBP eCLIP21■□□□□ 0.95
SHKBP1-222ENST00000600320 C1QBPQ07021 282 aaKnown RBP21■□□□□ 0.95
SHKBP1-222ENST00000600320 SNX30Q5VWJ9 437 aa21■□□□□ 0.95
SHKBP1-222ENST00000600320 TXNDC8Q6A555 127 aa21■□□□□ 0.95
SHKBP1-222ENST00000600320 MON1AQ86VX9 555 aa21■□□□□ 0.95
SHKBP1-222ENST00000600320 TMTC1Q8IUR5 882 aa21■□□□□ 0.95
SHKBP1-222ENST00000600320 NPAS3Q8IXF0 933 aa21■□□□□ 0.95
SHKBP1-222ENST00000600320 MSANTD4Q8NCY6 345 aa21■□□□□ 0.95
SHKBP1-222ENST00000600320 MRPS31Q92665 395 aaKnown RBP21■□□□□ 0.95
SHKBP1-222ENST00000600320 MCRS1Q96EZ8 462 aa21■□□□□ 0.95
SHKBP1-222ENST00000600320 MYADMQ96S97 322 aa21■□□□□ 0.95
SHKBP1-222ENST00000600320 TLR8Q9NR97 1041 aaKnown RBP21■□□□□ 0.95
SHKBP1-222ENST00000600320 TCRBV5S1A1TA0A578 114 aa20.99■□□□□ 0.95
SHKBP1-222ENST00000600320 C2orf78A6NCI8 922 aa20.99■□□□□ 0.95
SHKBP1-222ENST00000600320 GOLGA8SH3BPF8 625 aa20.99■□□□□ 0.95
SHKBP1-222ENST00000600320 DLL1O00548 723 aa20.99■□□□□ 0.95
SHKBP1-222ENST00000600320 GJB6O95452 261 aa20.99■□□□□ 0.95
SHKBP1-222ENST00000600320 CALB1P05937 261 aa20.99■□□□□ 0.95
SHKBP1-222ENST00000600320 FYNP06241 537 aa20.99■□□□□ 0.95
SHKBP1-222ENST00000600320 RRM1P23921 792 aa20.99■□□□□ 0.95
SHKBP1-222ENST00000600320 PPP3CCP48454 512 aa20.99■□□□□ 0.95
SHKBP1-222ENST00000600320 SLC6A3Q01959 620 aa20.99■□□□□ 0.95
SHKBP1-222ENST00000600320 GPR158Q5T848 1215 aa20.99■□□□□ 0.95
SHKBP1-222ENST00000600320 BSPRYQ5W0U4 402 aa20.99■□□□□ 0.95
SHKBP1-222ENST00000600320 PTCRAQ6ISU1 281 aaPredicted RBP20.99■□□□□ 0.95
SHKBP1-222ENST00000600320 FGF13Q92913 245 aa20.99■□□□□ 0.95
SHKBP1-222ENST00000600320 ZSWIM3Q96MP5 696 aa20.99■□□□□ 0.95
SHKBP1-222ENST00000600320 SLC46A2Q9BY10 475 aa20.99■□□□□ 0.95
SHKBP1-222ENST00000600320 THEGQ9P2T0 379 aa20.99■□□□□ 0.95
SHKBP1-222ENST00000600320 NUDT5Q9UKK9 219 aa20.99■□□□□ 0.95
SHKBP1-222ENST00000600320 UNC80Q8N2C7 3258 aa20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 ATMINO43313 823 aaPredicted RBP20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 GRAP2O75791 330 aa20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 LTFP02788 710 aa20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 RARGP13631 454 aa20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 IL9P15248 144 aa20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 GSCP56915 257 aaPredicted RBP20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 SNX16P57768 344 aa20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 ZNF268Q14587 947 aaPredicted RBP20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 PPP1R2P3Q6NXS1 205 aa20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 ZDHHC17Q8IUH5 632 aa20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 LRRC8AQ8IWT6 810 aa20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 CCDC170Q8IYT3 715 aa20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 EDEM1Q92611 657 aa20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 FAM149B1Q96BN6 582 aa20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 SLC22A12Q96S37 553 aa20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 PACSIN1Q9BY11 444 aa20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 TASP1Q9H6P5 420 aa20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 CCSER2Q9H7U1 834 aa20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 TRPC7Q9HCX4 862 aa20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.98■□□□□ 0.95
SHKBP1-222ENST00000600320 EYSQ5T1H1 3165 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 SART1O43290 800 aaKnown RBP20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 LCA5LO95447 670 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 OAS1P00973 400 aaKnown RBP20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 ABCB4P21439 1286 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 KCNQ1P51787 676 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 GALCP54803 685 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 SMAD2Q15796 467 aaKnown RBP20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 ARHGAP15Q53QZ3 475 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms