RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 FHOD1Q9Y613 1164 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 CPQQ9Y646 472 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 WNT6Q9Y6F9 365 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 TICRRQ7Z2Z1 1910 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 KANSL1LA0AUZ9 987 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 PIK3R2O00459 728 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 STK25O00506 426 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 PES1O00541 588 aaKnown RBP11.74□□□□□ -0.53
VRK3-210ENST00000596121 GREM1O60565 184 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 DCNP07585 359 aaKnown RBP11.74□□□□□ -0.53
VRK3-210ENST00000596121 MBL2P11226 248 aaPredicted RBP11.74□□□□□ -0.53
VRK3-210ENST00000596121 PFKLP17858 780 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 TARSP26639 723 aaKnown RBP11.74□□□□□ -0.53
VRK3-210ENST00000596121 CLCN1P35523 988 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 TUBP50607 506 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 BCAT1P54687 386 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 BST2Q10589 180 aaKnown RBP11.74□□□□□ -0.53
VRK3-210ENST00000596121 IQCB1Q15051 598 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 EML3Q32P44 896 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 PM20D1Q6GTS8 502 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 ENOSF1Q7L5Y1 443 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 SUGP1Q8IWZ8 645 aaKnown RBP11.74□□□□□ -0.53
VRK3-210ENST00000596121 CCDC105Q8IYK2 499 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 WDTC1Q8N5D0 677 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 PRSS33Q8NF86 280 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 ZNF606Q8WXB4 792 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 KCTD13Q8WZ19 329 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 BPIFA3Q9BQP9 254 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 KLF16Q9BXK1 252 aaPredicted RBP11.74□□□□□ -0.53
VRK3-210ENST00000596121 ULBP1Q9BZM6 244 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 DNAI2Q9GZS0 605 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 GANQ9H2C0 597 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 KIF9Q9HAQ2 790 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 LTB4R2Q9NPC1 389 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 CYLDQ9NQC7 956 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.74□□□□□ -0.53
VRK3-210ENST00000596121 CFAP97Q9P2B7 532 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 HESX1Q9UBX0 185 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 SIK3Q9Y2K2 1263 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 PIAS3Q9Y6X2 628 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 CACNA1HO95180 2353 aa11.74□□□□□ -0.53
VRK3-210ENST00000596121 FAM170BA6NMN3 283 aa11.73□□□□□ -0.53
VRK3-210ENST00000596121 SPECC1L-ADORA2AF8WAN1 911 aa11.73□□□□□ -0.53
VRK3-210ENST00000596121 M0QYV0 167 aa11.73□□□□□ -0.53
VRK3-210ENST00000596121 TLR5O60602 858 aa11.73□□□□□ -0.53
VRK3-210ENST00000596121 LETM1O95202 739 aaPredicted RBP11.73□□□□□ -0.53
VRK3-210ENST00000596121 SETSIPP0DME0 302 aa11.73□□□□□ -0.53
VRK3-210ENST00000596121 RARGP13631 454 aa11.73□□□□□ -0.53
VRK3-210ENST00000596121 UCHL3P15374 230 aa11.73□□□□□ -0.53
VRK3-210ENST00000596121 USP8P40818 1118 aa11.73□□□□□ -0.53
VRK3-210ENST00000596121 GPD2P43304 727 aa11.73□□□□□ -0.53
VRK3-210ENST00000596121 RPL34P49207 117 aaKnown RBP11.73□□□□□ -0.53
VRK3-210ENST00000596121 PLCB2Q00722 1185 aa11.73□□□□□ -0.53
VRK3-210ENST00000596121 ADIGQ0VDE8 80 aa11.73□□□□□ -0.53
VRK3-210ENST00000596121 DRAP1Q14919 205 aaPredicted RBP11.73□□□□□ -0.53
VRK3-210ENST00000596121 SLC47A2Q86VL8 602 aa11.73□□□□□ -0.53
VRK3-210ENST00000596121 FAM71AQ8IYT1 594 aa11.73□□□□□ -0.53
VRK3-210ENST00000596121 PJA1Q8NG27 643 aa11.73□□□□□ -0.53
VRK3-210ENST00000596121 CLEC4CQ8WTT0 213 aa11.73□□□□□ -0.53
VRK3-210ENST00000596121 OSCP1Q8WVF1 389 aa11.73□□□□□ -0.53
VRK3-210ENST00000596121 FBRSL1Q9HCM7 1045 aaKnown RBP11.73□□□□□ -0.53
VRK3-210ENST00000596121 TLR8Q9NR97 1041 aaKnown RBP11.73□□□□□ -0.53
VRK3-210ENST00000596121 THG1LQ9NWX6 298 aaKnown RBP11.73□□□□□ -0.53
VRK3-210ENST00000596121 DUS2Q9NX74 493 aaKnown RBP11.73□□□□□ -0.53
VRK3-210ENST00000596121 NAGPAQ9UK23 515 aa11.73□□□□□ -0.53
VRK3-210ENST00000596121 SIT1Q9Y3P8 196 aa11.73□□□□□ -0.53
VRK3-210ENST00000596121 YJEFN3A6XGL0 299 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 E7ENQ6 273 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 THAP12O43422 761 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 ZBED1O96006 694 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 LCP1P13796 627 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 GNA15P30679 374 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 CTHP32929 405 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 ZNF165P49910 485 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 KPNA1P52294 538 aaPredicted RBP11.72□□□□□ -0.53
VRK3-210ENST00000596121 MLLT6P55198 1093 aaPredicted RBP11.72□□□□□ -0.53
VRK3-210ENST00000596121 TCF15Q12870 199 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 RUNX3Q13761 415 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 UBXN2BQ14CS0 331 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 GAB4Q2WGN9 574 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 ITPRIPL2Q3MIP1 535 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 ZSCAN23Q3MJ62 389 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 CSGALNACT1Q8TDX6 532 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 FAM3CQ92520 227 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 P2RY11Q96G91 374 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 SHDQ96IW2 340 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 LRRC4Q9HBW1 653 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 CBX8Q9HC52 389 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 TJP2Q9UDY2 1190 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 HELZP42694 1942 aaKnown RBP11.72□□□□□ -0.53
VRK3-210ENST00000596121 MYO16Q9Y6X6 1858 aa11.72□□□□□ -0.53
VRK3-210ENST00000596121 LGALS16A8MUM7 142 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 TEX33O43247 280 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 IRF1P10914 325 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 ATP5C1P36542 298 aaKnown RBP11.71□□□□□ -0.53
VRK3-210ENST00000596121 PDE6CP51160 858 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 DAOAP59103 153 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 YWHAGP61981 247 aaKnown RBP eCLIP11.71□□□□□ -0.53
VRK3-210ENST00000596121 RAPGEF1Q13905 1077 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 PDGFRLQ15198 375 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms