RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CYTH4Q9UIA0 394 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 USP18Q9UMW8 372 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 WNT10BO00744 389 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 B4GALT4O60513 344 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 MAFO75444 373 aaPredicted RBP13.77□□□□□ -0.21
VRK3-209ENST00000594948 KRT38O76015 456 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 HOXC6P09630 235 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 ANPEPP15144 967 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 KCNA3P22001 575 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 PSMC4P43686 418 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 CACNA2D1P54289 1103 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 AP2B1P63010 937 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 SP4Q02446 784 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 BST1Q10588 318 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 ZNF394Q53GI3 561 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 SCARA3Q6AZY7 606 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 ARCQ7LC44 396 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 TTC7BQ86TV6 843 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 TREML1Q86YW5 311 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 CRLF3Q8IUI8 442 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 ARHGAP18Q8N392 663 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 C12orf42Q96LP6 360 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 FAM161BQ96MY7 647 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 ACO2Q99798 780 aaKnown RBP13.77□□□□□ -0.21
VRK3-209ENST00000594948 CCDC106Q9BWC9 280 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 ACAD9Q9H845 621 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 USP29Q9HBJ7 922 aa13.77□□□□□ -0.21
VRK3-209ENST00000594948 ZNF214Q9UL59 606 aaPredicted RBP13.77□□□□□ -0.21
VRK3-209ENST00000594948 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.77□□□□□ -0.21
VRK3-209ENST00000594948 ZBTB12Q9Y330 459 aaPredicted RBP13.77□□□□□ -0.21
VRK3-209ENST00000594948 ANKRD33BA6NCL7 494 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 EIF4E1BA6NMX2 242 aaKnown RBP13.76□□□□□ -0.21
VRK3-209ENST00000594948 E5RJQ4 531 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 GAS2O43903 313 aaKnown RBP13.76□□□□□ -0.21
VRK3-209ENST00000594948 RFPL1O75677 317 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 PIAS1O75925 651 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 ERBB2P04626 1255 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 SERPINA6P08185 405 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 HARSP12081 509 aaKnown RBP13.76□□□□□ -0.21
VRK3-209ENST00000594948 TGM2P21980 687 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 OSBPP22059 807 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 CNTFP26441 200 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 CRABP2P29373 138 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 ZNF143P52747 638 aaPredicted RBP13.76□□□□□ -0.21
VRK3-209ENST00000594948 TMPRSS15P98073 1019 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 DGKZQ13574 1117 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 TNFAIP1Q13829 316 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 PDK2Q15119 407 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 SEZ6Q53EL9 994 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 IER5Q5VY09 327 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 TIFABQ6ZNK6 161 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 CDHR3Q6ZTQ4 885 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 ALYREFQ86V81 257 aaKnown RBP13.76□□□□□ -0.21
VRK3-209ENST00000594948 PPM1NQ8N819 430 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 RBM15BQ8NDT2 890 aaKnown RBP13.76□□□□□ -0.21
VRK3-209ENST00000594948 ANKRD36BP1Q96IX9 119 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 CPXM1Q96SM3 734 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 CNPY3Q9BT09 278 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 KLC2Q9H0B6 622 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 IL1RAPL1Q9NZN1 696 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 PPARGC1AQ9UBK2 798 aaKnown RBP13.76□□□□□ -0.21
VRK3-209ENST00000594948 ZC3H7BQ9UGR2 993 aaKnown RBP13.76□□□□□ -0.21
VRK3-209ENST00000594948 C2CD2Q9Y426 696 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 ZSWIM8A7E2V4 1837 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 A0A0G2JMZ2 1700 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 LRRC37A2A6NM11 1700 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 BCLAF3A2AJT9 711 aaKnown RBP13.76□□□□□ -0.21
VRK3-209ENST00000594948 ZNF487B1APH4 448 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 H3BRJ5 948 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 APOEP02649 317 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 BPGMP07738 259 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 CD19P15391 556 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 AOC1P19801 751 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 CRHR1P34998 444 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 MRPS5P82675 430 aaKnown RBP13.76□□□□□ -0.21
VRK3-209ENST00000594948 HSF5Q4G112 596 aaPredicted RBP13.76□□□□□ -0.21
VRK3-209ENST00000594948 THEMIS2Q5TEJ8 643 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 MTHFD1LQ6UB35 978 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 CYS1Q717R9 158 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 PRPF39Q86UA1 669 aaKnown RBP13.76□□□□□ -0.21
VRK3-209ENST00000594948 NUDCD3Q8IVD9 361 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 ULK2Q8IYT8 1036 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 DTX3LQ8TDB6 740 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 HSPH1Q92598 858 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 WNK4Q96J92 1243 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 RNF157Q96PX1 679 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 CALN1Q9BXU9 219 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 MIS12Q9H081 205 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 C2orf40Q9H1Z8 148 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 FAM124BQ9H5Z6 455 aaPredicted RBP13.76□□□□□ -0.21
VRK3-209ENST00000594948 AS3MTQ9HBK9 375 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 ARMCX1Q9P291 453 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 TJP2Q9UDY2 1190 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 PCSK1NQ9UHG2 260 aa13.76□□□□□ -0.21
VRK3-209ENST00000594948 HBS1LQ9Y450 684 aaKnown RBP13.76□□□□□ -0.21
VRK3-209ENST00000594948 FAM159BA6NKW6 160 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 H7C0C1 242 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 TOMM70O94826 608 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 MYCNP04198 464 aaPredicted RBP13.75□□□□□ -0.21
VRK3-209ENST00000594948 ENO1P06733 434 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms