RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 KLHDC10Q6PID8 442 aa18.71■□□□□ 0.59
SHKBP1-204ENST00000594862 CCDC186Q7Z3E2 898 aa18.71■□□□□ 0.59
SHKBP1-204ENST00000594862 ARHGAP18Q8N392 663 aa18.71■□□□□ 0.59
SHKBP1-204ENST00000594862 ANKRD52Q8NB46 1076 aa18.71■□□□□ 0.59
SHKBP1-204ENST00000594862 ATRIPQ8WXE1 791 aa18.71■□□□□ 0.59
SHKBP1-204ENST00000594862 NUP62CLQ9H1M0 184 aa18.71■□□□□ 0.59
SHKBP1-204ENST00000594862 SMPD4Q9NXE4 827 aa18.71■□□□□ 0.59
SHKBP1-204ENST00000594862 CFAP97Q9P2B7 532 aa18.71■□□□□ 0.59
SHKBP1-204ENST00000594862 CHORDC1Q9UHD1 332 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-204ENST00000594862 SH3BP1Q9Y3L3 701 aa18.71■□□□□ 0.59
SHKBP1-204ENST00000594862 ADH1CP00326 375 aa18.7■□□□□ 0.58
SHKBP1-204ENST00000594862 PAEPP09466 180 aa18.7■□□□□ 0.58
SHKBP1-204ENST00000594862 VDRP11473 427 aa18.7■□□□□ 0.58
SHKBP1-204ENST00000594862 KIF11P52732 1056 aa18.7■□□□□ 0.58
SHKBP1-204ENST00000594862 KCNH2Q12809 1159 aa18.7■□□□□ 0.58
SHKBP1-204ENST00000594862 STILQ15468 1287 aa18.7■□□□□ 0.58
SHKBP1-204ENST00000594862 SMYD5Q6GMV2 418 aa18.7■□□□□ 0.58
SHKBP1-204ENST00000594862 PPM1KQ8N3J5 372 aa18.7■□□□□ 0.58
SHKBP1-204ENST00000594862 ZNF276Q8N554 614 aa18.7■□□□□ 0.58
SHKBP1-204ENST00000594862 NELL1Q92832 810 aa18.7■□□□□ 0.58
SHKBP1-204ENST00000594862 CD101Q93033 1021 aa18.7■□□□□ 0.58
SHKBP1-204ENST00000594862 JAKMIP2Q96AA8 810 aa18.7■□□□□ 0.58
SHKBP1-204ENST00000594862 FAM81BQ96LP2 452 aa18.7■□□□□ 0.58
SHKBP1-204ENST00000594862 CCSER2Q9H7U1 834 aa18.7■□□□□ 0.58
SHKBP1-204ENST00000594862 CLIC5Q9NZA1 410 aa18.7■□□□□ 0.58
SHKBP1-204ENST00000594862 OTOL1A6NHN0 477 aaPredicted RBP18.69■□□□□ 0.58
SHKBP1-204ENST00000594862 GOLGA6L22H0YM25 854 aa18.69■□□□□ 0.58
SHKBP1-204ENST00000594862 LMNAP02545 664 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-204ENST00000594862 SETSIPP0DME0 302 aa18.69■□□□□ 0.58
SHKBP1-204ENST00000594862 RALAP11233 206 aa18.69■□□□□ 0.58
SHKBP1-204ENST00000594862 CD19P15391 556 aa18.69■□□□□ 0.58
SHKBP1-204ENST00000594862 ATP5C1P36542 298 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-204ENST00000594862 EIF2DP41214 584 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-204ENST00000594862 GPRIN1Q7Z2K8 1008 aa18.69■□□□□ 0.58
SHKBP1-204ENST00000594862 FAM114A1Q8IWE2 563 aa18.69■□□□□ 0.58
SHKBP1-204ENST00000594862 UBR7Q8N806 425 aa18.69■□□□□ 0.58
SHKBP1-204ENST00000594862 ZBTB44Q8NCP5 570 aa18.69■□□□□ 0.58
SHKBP1-204ENST00000594862 LSM7Q9UK45 103 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-204ENST00000594862 USP3Q9Y6I4 520 aa18.69■□□□□ 0.58
SHKBP1-204ENST00000594862 CACNA1IQ9P0X4 2223 aa18.69■□□□□ 0.58
SHKBP1-204ENST00000594862 GVINP1Q7Z2Y8 2422 aa18.68■□□□□ 0.58
SHKBP1-204ENST00000594862 CYP26A1O43174 497 aa18.68■□□□□ 0.58
SHKBP1-204ENST00000594862 ZXDBP98169 803 aa18.68■□□□□ 0.58
SHKBP1-204ENST00000594862 BST2Q10589 180 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-204ENST00000594862 LRMPQ12912 555 aa18.68■□□□□ 0.58
SHKBP1-204ENST00000594862 TPD52L1Q16890 204 aaPredicted RBP18.68■□□□□ 0.58
SHKBP1-204ENST00000594862 GOLGA7BQ2TAP0 167 aa18.68■□□□□ 0.58
SHKBP1-204ENST00000594862 PREPLQ4J6C6 727 aaPredicted RBP18.68■□□□□ 0.58
SHKBP1-204ENST00000594862 CT47A1Q5JQC4 288 aaPredicted RBP18.68■□□□□ 0.58
SHKBP1-204ENST00000594862 FSTL4Q6MZW2 842 aa18.68■□□□□ 0.58
SHKBP1-204ENST00000594862 ASCL5Q7RTU5 278 aa18.68■□□□□ 0.58
SHKBP1-204ENST00000594862 EHBP1Q8NDI1 1231 aa18.68■□□□□ 0.58
SHKBP1-204ENST00000594862 ZFRQ96KR1 1074 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-204ENST00000594862 CNOT6LQ96LI5 555 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-204ENST00000594862 RBM12Q9NTZ6 932 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-204ENST00000594862 NAGPAQ9UK23 515 aa18.68■□□□□ 0.58
SHKBP1-204ENST00000594862 TSPAN16Q9UKR8 245 aa18.68■□□□□ 0.58
SHKBP1-204ENST00000594862 R4GN57 208 aa18.68■□□□□ 0.58
SHKBP1-204ENST00000594862 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.67■□□□□ 0.58
SHKBP1-204ENST00000594862 XPO1O14980 1071 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-204ENST00000594862 ERCC5P28715 1186 aaPredicted RBP18.67■□□□□ 0.58
SHKBP1-204ENST00000594862 HOXA6P31267 233 aa18.67■□□□□ 0.58
SHKBP1-204ENST00000594862 RAB41Q5JT25 222 aa18.67■□□□□ 0.58
SHKBP1-204ENST00000594862 TMEM270Q6UE05 265 aa18.67■□□□□ 0.58
SHKBP1-204ENST00000594862 ENOSF1Q7L5Y1 443 aa18.67■□□□□ 0.58
SHKBP1-204ENST00000594862 PIGZQ86VD9 579 aa18.67■□□□□ 0.58
SHKBP1-204ENST00000594862 LMO3Q8TAP4 145 aa18.67■□□□□ 0.58
SHKBP1-204ENST00000594862 ACDQ96AP0 544 aa18.67■□□□□ 0.58
SHKBP1-204ENST00000594862 CHFRQ96EP1 664 aa18.67■□□□□ 0.58
SHKBP1-204ENST00000594862 LINC00597Q9H2U6 94 aa18.67■□□□□ 0.58
SHKBP1-204ENST00000594862 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.67■□□□□ 0.58
SHKBP1-204ENST00000594862 DNMT3LQ9UJW3 386 aa18.67■□□□□ 0.58
SHKBP1-204ENST00000594862 PCDHB4Q9Y5E5 795 aa18.67■□□□□ 0.58
SHKBP1-204ENST00000594862 A0A1W2PQH9 124 aa18.66■□□□□ 0.58
SHKBP1-204ENST00000594862 CHURC1-FNTBB4DL54 471 aa18.66■□□□□ 0.58
SHKBP1-204ENST00000594862 O00370 1275 aa18.66■□□□□ 0.58
SHKBP1-204ENST00000594862 LILRB5O75023 590 aa18.66■□□□□ 0.58
SHKBP1-204ENST00000594862 CYP17A1P05093 508 aa18.66■□□□□ 0.58
SHKBP1-204ENST00000594862 TDGF1P13385 188 aa18.66■□□□□ 0.58
SHKBP1-204ENST00000594862 RARGP13631 454 aa18.66■□□□□ 0.58
SHKBP1-204ENST00000594862 GALK1P51570 392 aa18.66■□□□□ 0.58
SHKBP1-204ENST00000594862 SATB1Q01826 763 aa18.66■□□□□ 0.58
SHKBP1-204ENST00000594862 GAS6Q14393 721 aa18.66■□□□□ 0.58
SHKBP1-204ENST00000594862 DHCR24Q15392 516 aa18.66■□□□□ 0.58
SHKBP1-204ENST00000594862 Q6ZS52 159 aa18.66■□□□□ 0.58
SHKBP1-204ENST00000594862 ADGRG2Q8IZP9 1017 aa18.66■□□□□ 0.58
SHKBP1-204ENST00000594862 INTS2Q9H0H0 1204 aaKnown RBP18.66■□□□□ 0.58
SHKBP1-204ENST00000594862 THAP9Q9H5L6 903 aa18.66■□□□□ 0.58
SHKBP1-204ENST00000594862 LRRC4Q9HBW1 653 aa18.66■□□□□ 0.58
SHKBP1-204ENST00000594862 EP300Q09472 2414 aaPredicted RBP18.65■□□□□ 0.58
SHKBP1-204ENST00000594862 ZNF292O60281 2723 aa18.65■□□□□ 0.58
SHKBP1-204ENST00000594862 GTPBP10A4D1E9 387 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-204ENST00000594862 ADH5P11766 374 aa18.65■□□□□ 0.58
SHKBP1-204ENST00000594862 CNR2P34972 360 aa18.65■□□□□ 0.58
SHKBP1-204ENST00000594862 PLA2G4AP47712 749 aa18.65■□□□□ 0.58
SHKBP1-204ENST00000594862 GAD2Q05329 585 aa18.65■□□□□ 0.58
SHKBP1-204ENST00000594862 C10orf120Q5SQS8 335 aa18.65■□□□□ 0.58
SHKBP1-204ENST00000594862 BTBD8Q5XKL5 378 aa18.65■□□□□ 0.58
SHKBP1-204ENST00000594862 LCLAT1Q6UWP7 414 aa18.65■□□□□ 0.58
SHKBP1-204ENST00000594862 HTR3DQ70Z44 454 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms