RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 MFSD7Q6UXD7 560 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 ASRGL1Q7L266 308 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 TMEM126BQ8IUX1 230 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 FAM71DQ8N9W8 422 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 PIWIL2Q8TC59 973 aaKnown RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 C10orf82Q8WW14 230 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 CD101Q93033 1021 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 ABTB1Q969K4 478 aaPredicted RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 DGCR14Q96DF8 476 aaKnown RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 TSPAN17Q96FV3 270 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 ZNF333Q96JL9 665 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 GPR101Q96P66 508 aaPredicted RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 EIF2AQ9BY44 585 aaKnown RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 BRD8Q9H0E9 1235 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 TRPV6Q9H1D0 765 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 TMEM134Q9H6X4 195 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 ACAD9Q9H845 621 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 DBNDD1Q9H9R9 158 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 RNF146Q9NTX7 359 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 HOXC10Q9NYD6 342 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 PKD2L2Q9NZM6 624 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 BLOC1S6Q9UL45 172 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 NENFQ9UMX5 172 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 ANKRD6Q9Y2G4 727 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 HEY1Q9Y5J3 304 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 COMMD10Q9Y6G5 202 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 CCDC195A0A1B0GUA6 201 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 FAM196BA6NMK8 535 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 BHMG1C9JSJ3 638 aaPredicted RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 H3BNX3 289 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 INO80B-WBP1J3KQ70 363 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 MAP3K13O43283 966 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 PEX11AO75192 247 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 SKAP2O75563 359 aaPredicted RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 ARP10275 920 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 CYP2C9P11712 490 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 UQCRBP14927 111 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 SERPINB10P48595 397 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 CCNHP51946 323 aaPredicted RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 RAP1GDS1P52306 607 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 OAZ1P54368 228 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 NR1H2P55055 460 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 ACTR2P61160 394 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 NOMO3P69849 1222 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 PRKCEQ02156 737 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 DCTN2Q13561 401 aaKnown RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 HP1BP3Q5SSJ5 553 aaPredicted RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 GRTP1Q5TC63 336 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 STYK1Q6J9G0 422 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 C3orf67Q6ZVT6 689 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 EFL1Q7Z2Z2 1120 aaKnown RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 ADGRG6Q86SQ4 1221 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 NT5DC4Q86YG4 428 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 KSR1Q8IVT5 923 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 KYQ8NBH2 561 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 CCNYQ8ND76 341 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 GDPD5Q8WTR4 605 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 SLC44A1Q8WWI5 657 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 ZNF606Q8WXB4 792 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 EME1Q96AY2 570 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 CCT7Q99832 543 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 TMEM121Q9BTD3 319 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 MAGEB5Q9BZ81 275 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 INO80BQ9C086 356 aaPredicted RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 CYP4F11Q9HBI6 524 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 PCSK1NQ9UHG2 260 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 RABGEF1Q9UJ41 708 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 AGAP1Q9UPQ3 857 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 CHKBQ9Y259 395 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 SQORQ9Y6N5 450 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 TNRC6CQ9HCJ0 1690 aaKnown RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 LAMB2P55268 1798 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 DPPA5A6NC42 116 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 SMIM22K7EJ46 135 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 NCAM2O15394 837 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 CFLARO15519 480 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 ENTPD5O75356 428 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 CSDE1O75534 798 aaKnown RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 CYP1A1P04798 512 aaPredicted RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 PRKCBP05771 671 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 RALBP11234 206 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 GLRA2P23416 452 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 SSTR3P32745 418 aaPredicted RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 ELK3P41970 407 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 RBP5P82980 135 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 SPIRE1Q08AE8 756 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 DPYSL3Q14195 570 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 ZACNQ401N2 412 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 LIN52Q52LA3 116 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 SPANXN3Q5MJ09 141 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 PDPK2PQ6A1A2 396 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 PRMT9Q6P2P2 845 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 RSBN1LQ6PCB5 846 aaPredicted RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 MON1BQ7L1V2 547 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 LINC00523Q86TU6 105 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 CLEC10AQ8IUN9 316 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 TAB3Q8N5C8 712 aaPredicted RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 NIPA2Q8N8Q9 360 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 TTC8Q8TAM2 541 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 RDH11Q8TC12 318 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms