RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 ADCYAP1R1P41586 468 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 LAMB3Q13751 1172 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 IL31Q6EBC2 164 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 CTU1Q7Z7A3 348 aaKnown RBP13.16□□□□□ -0.3
DNMT1-228ENST00000592705 CALML6Q8TD86 181 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 DNAJB3Q8WWF6 145 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 VCPIP1Q96JH7 1222 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 SRP72O76094 671 aaKnown RBP13.16□□□□□ -0.3
DNMT1-228ENST00000592705 GNL1P36915 607 aaPredicted RBP13.16□□□□□ -0.3
DNMT1-228ENST00000592705 BEX3Q00994 111 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 GCNT1Q02742 428 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 SPRYD7Q5W111 196 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 SLC26A11Q86WA9 606 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 RIOX2Q8IUF8 465 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 TMEM139Q8IV31 216 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 WDR49Q8IV35 697 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 PCYOX1LQ8NBM8 494 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 CEP19Q96LK0 163 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 TRIM54Q9BYV2 358 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 HACD3Q9P035 362 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 GGA2Q9UJY4 613 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 FZD1Q9UP38 647 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 FAM200BP0CF97 657 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 RARAP10276 462 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 ALDH5A1P51649 535 aaPredicted RBP13.16□□□□□ -0.3
DNMT1-228ENST00000592705 PTF1AQ7RTS3 328 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 TMEM121Q9BTD3 319 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 MTMR12Q9C0I1 747 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 STX18Q9P2W9 335 aaKnown RBP13.16□□□□□ -0.3
DNMT1-228ENST00000592705 H2AFYO75367 372 aaKnown RBP13.16□□□□□ -0.3
DNMT1-228ENST00000592705 GFAPP14136 432 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 INSRRP14616 1297 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 CNTFP26441 200 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 PPM1AP35813 382 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 VCPP55072 806 aaKnown RBP13.16□□□□□ -0.3
DNMT1-228ENST00000592705 OOSP2Q86WS3 158 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 SYTL5Q8TDW5 730 aaPredicted RBP13.16□□□□□ -0.3
DNMT1-228ENST00000592705 SARS2Q9NP81 518 aaKnown RBP13.16□□□□□ -0.3
DNMT1-228ENST00000592705 AVENQ9NQS1 362 aaPredicted RBP13.16□□□□□ -0.3
DNMT1-228ENST00000592705 ARHGAP26Q9UNA1 814 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 RCCD1A6NED2 376 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 PRR23AA6NEV1 266 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 UBTFL6P0CB48 400 aaPredicted RBP13.16□□□□□ -0.3
DNMT1-228ENST00000592705 HADHAP40939 763 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 PTGER2P43116 358 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 NAPEPLDQ6IQ20 393 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 MTDHQ86UE4 582 aaKnown RBP13.16□□□□□ -0.3
DNMT1-228ENST00000592705 BAP1Q92560 729 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 PKD2L2Q9NZM6 624 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 AKAP7Q9P0M2 348 aaPredicted RBP13.16□□□□□ -0.3
DNMT1-228ENST00000592705 DNALI1O14645 258 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-228ENST00000592705 VTNP04004 478 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 CYP3A4P08684 503 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 HSPA13P48723 471 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 APOBEC3HQ6NTF7 200 aaKnown RBP13.15□□□□□ -0.3
DNMT1-228ENST00000592705 NIPA1Q7RTP0 329 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 ZNF669Q96BR6 464 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-228ENST00000592705 FTHL17Q9BXU8 183 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 KCNQ5Q9NR82 932 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 PLA2G4CQ9UP65 541 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 ZW10O43264 779 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 FGBP02675 491 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 IFI35P80217 286 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-228ENST00000592705 CAPRIN1Q14444 709 aaKnown RBP13.15□□□□□ -0.3
DNMT1-228ENST00000592705 KCNT1Q5JUK3 1230 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 FOPNLQ96NB1 174 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 SLC25A13Q9UJS0 675 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 LOC100653049A0A140TA62 436 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 KRT34O76011 436 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 SLC2A3P11169 496 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 ELNP15502 786 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 CREMQ03060 361 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 ITGB3BPQ13352 177 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-228ENST00000592705 PTK6Q13882 451 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 DCAF6Q58WW2 860 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 WASHC2DQ5SRD0 308 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 MPZL3Q6UWV2 235 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 SCUBE1Q8IWY4 988 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 TRIM48Q8IWZ4 208 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 SPIRE2Q8WWL2 714 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 FBXO32Q969P5 355 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 DACT3Q96B18 629 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-228ENST00000592705 TMEM120AQ9BXJ8 343 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 NINJ2Q9NZG7 142 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 SLC13A4Q9UKG4 626 aa13.15□□□□□ -0.3
DNMT1-228ENST00000592705 NFIBO00712 420 aa13.15□□□□□ -0.31
DNMT1-228ENST00000592705 AKAP10O43572 662 aa13.15□□□□□ -0.31
DNMT1-228ENST00000592705 RARRES1P49788 294 aa13.15□□□□□ -0.31
DNMT1-228ENST00000592705 ZBTB41Q5SVQ8 909 aa13.15□□□□□ -0.31
DNMT1-228ENST00000592705 TATDN2Q93075 761 aa13.15□□□□□ -0.31
DNMT1-228ENST00000592705 EGFL8Q99944 293 aa13.15□□□□□ -0.31
DNMT1-228ENST00000592705 TSEN34Q9BSV6 310 aaKnown RBP13.15□□□□□ -0.31
DNMT1-228ENST00000592705 ASPSCR1Q9BZE9 553 aa13.15□□□□□ -0.31
DNMT1-228ENST00000592705 GANQ9H2C0 597 aa13.15□□□□□ -0.31
DNMT1-228ENST00000592705 HIPK3Q9H422 1215 aa13.15□□□□□ -0.31
DNMT1-228ENST00000592705 KCNMB3Q9NPA1 279 aa13.15□□□□□ -0.31
DNMT1-228ENST00000592705 MRPL17Q9NRX2 175 aaKnown RBP13.15□□□□□ -0.31
DNMT1-228ENST00000592705 TAGLN3Q9UI15 199 aa13.15□□□□□ -0.31
DNMT1-228ENST00000592705 SPDYE5A6NIY4 337 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 TRPC5OSA6NMA1 111 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms