RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 EN1Q05925 392 aaPredicted RBP12.08□□□□□ -0.48
ZNF540-210ENST00000592533 MMRN1Q13201 1228 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 DALRD3Q5D0E6 543 aaKnown RBP12.08□□□□□ -0.48
ZNF540-210ENST00000592533 CELF3Q5SZQ8 465 aaKnown RBP12.08□□□□□ -0.48
ZNF540-210ENST00000592533 LCLAT1Q6UWP7 414 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 IFNLR1Q8IU57 520 aaPredicted RBP12.08□□□□□ -0.48
ZNF540-210ENST00000592533 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.08□□□□□ -0.48
ZNF540-210ENST00000592533 KCNV2Q8TDN2 545 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 MTBPQ96DY7 904 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 OXNAD1Q96HP4 312 aaPredicted RBP12.08□□□□□ -0.48
ZNF540-210ENST00000592533 SRPK1Q96SB4 655 aaKnown RBP12.08□□□□□ -0.48
ZNF540-210ENST00000592533 TBCBQ99426 244 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 ASB7Q9H672 318 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 SIRPGQ9P1W8 387 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 PLLPQ9Y342 182 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 SOCS7O14512 581 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 KRT37O76014 449 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 SNRPAP09012 282 aaKnown RBP12.07□□□□□ -0.48
ZNF540-210ENST00000592533 RARBP10826 455 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 BGNP21810 368 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 YWHAGP61981 247 aaKnown RBP eCLIP12.07□□□□□ -0.48
ZNF540-210ENST00000592533 LY6KQ17RY6 165 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 CAND1Q86VP6 1230 aaKnown RBP12.07□□□□□ -0.48
ZNF540-210ENST00000592533 APLFQ8IW19 511 aaPredicted RBP12.07□□□□□ -0.48
ZNF540-210ENST00000592533 MAP7D3Q8IWC1 876 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 TMEM192Q8IY95 271 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 KIRREL3Q8IZU9 778 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 GBA2Q9HCG7 927 aaPredicted RBP12.07□□□□□ -0.48
ZNF540-210ENST00000592533 PRMT7Q9NVM4 692 aaPredicted RBP12.07□□□□□ -0.48
ZNF540-210ENST00000592533 STOML1Q9UBI4 398 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 PDCD11Q14690 1871 aaKnown RBP12.07□□□□□ -0.48
ZNF540-210ENST00000592533 CAPN14A8MX76 684 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 COPEO14579 308 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 TOMM70O94826 608 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 PAX7P23759 505 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 NRLP54845 237 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 TNFAIP2Q03169 654 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 DBN1Q16643 649 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 KYAT1Q16773 422 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 BOLA3Q53S33 107 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 RFWD3Q6PCD5 774 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 PRPF39Q86UA1 669 aaKnown RBP12.07□□□□□ -0.48
ZNF540-210ENST00000592533 PQLC3Q8N755 202 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 RXFP2Q8WXD0 754 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 KAT6AQ92794 2004 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 ARHGEF4Q9NR80 690 aa12.07□□□□□ -0.48
ZNF540-210ENST00000592533 BARX2Q9UMQ3 279 aaPredicted RBP12.07□□□□□ -0.48
ZNF540-210ENST00000592533 LACTBL1A8MY62 500 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 GPR25O00155 361 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 MDM4O15151 490 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 RFPL1O75677 317 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 ARIH2O95376 493 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 ITGB3P05106 788 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 KRT19P08727 400 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 CYP3A5P20815 502 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 RAP1GDS1P52306 607 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 OCRLQ01968 901 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 STILQ15468 1287 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 KHDC1Q4VXA5 237 aaKnown RBP12.06□□□□□ -0.48
ZNF540-210ENST00000592533 TEX44Q53QW1 395 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 JADE1Q6IE81 842 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 ZC3H18Q86VM9 953 aaKnown RBP12.06□□□□□ -0.48
ZNF540-210ENST00000592533 KLC2Q9H0B6 622 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 FZD1Q9UP38 647 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 SCN4AP35499 1836 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 TRIM49D1C9J1S8 452 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 PRPSAP2O60256 369 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 PFKMP08237 780 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 OSBPP22059 807 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 MRPS5P82675 430 aaKnown RBP12.06□□□□□ -0.48
ZNF540-210ENST00000592533 AMHR2Q16671 573 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 TSNAXIP1Q2TAA8 658 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 HSDL1Q3SXM5 330 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 LGSNQ5TDP6 509 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 DSTYKQ6XUX3 929 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 CDHR3Q6ZTQ4 885 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 FAM183BPQ6ZVS7 135 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 CYS1Q717R9 158 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 TTC17Q96AE7 1141 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 ZNF333Q96JL9 665 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 FGD4Q96M96 766 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 ZNF670Q9BS34 389 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 SPATC1LQ9H0A9 340 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 MINDY3Q9H8M7 445 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 FBXO6Q9NRD1 293 aaPredicted RBP12.06□□□□□ -0.48
ZNF540-210ENST00000592533 RAB6BQ9NRW1 208 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 ETNK2Q9NVF9 386 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 TAS2R1Q9NYW7 299 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 GTF2IRD1Q9UHL9 959 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 FAM159BA6NKW6 160 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 A8MXQ7 604 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 H7C0C1 242 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 INO80B-WBP1J3KQ70 363 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 APOL1O14791 398 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 GYG2O15488 501 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 APOEP02649 317 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 IQCF3P0C7M6 154 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 STAG3L1P0CL83 205 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 PDGFRAP16234 1089 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 TPSB2P20231 275 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms