RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 CEP135Q66GS9 1140 aa19.96■□□□□ 0.79
CCDC43-205ENST00000592333 KLHDC10Q6PID8 442 aa19.96■□□□□ 0.79
CCDC43-205ENST00000592333 TRMT11Q7Z4G4 463 aaKnown RBP19.96■□□□□ 0.79
CCDC43-205ENST00000592333 GUF1Q8N442 669 aaKnown RBP19.96■□□□□ 0.79
CCDC43-205ENST00000592333 ZNF276Q8N554 614 aa19.96■□□□□ 0.79
CCDC43-205ENST00000592333 TTC39CQ8N584 583 aa19.96■□□□□ 0.79
CCDC43-205ENST00000592333 SLC2A14Q8TDB8 520 aa19.96■□□□□ 0.79
CCDC43-205ENST00000592333 CCDC34Q96HJ3 373 aa19.96■□□□□ 0.79
CCDC43-205ENST00000592333 HNRNPABQ99729 332 aaKnown RBP19.96■□□□□ 0.79
CCDC43-205ENST00000592333 SMOQ99835 787 aa19.96■□□□□ 0.79
CCDC43-205ENST00000592333 POLMQ9NP87 494 aaPredicted RBP19.96■□□□□ 0.79
CCDC43-205ENST00000592333 CYLDQ9NQC7 956 aa19.96■□□□□ 0.79
CCDC43-205ENST00000592333 POLR3BQ9NW08 1133 aaPredicted RBP19.96■□□□□ 0.79
CCDC43-205ENST00000592333 BCLAF3A2AJT9 711 aaKnown RBP19.95■□□□□ 0.78
CCDC43-205ENST00000592333 GTF2H1P32780 548 aa19.95■□□□□ 0.78
CCDC43-205ENST00000592333 KIR2DL1P43626 348 aaPredicted RBP19.95■□□□□ 0.78
CCDC43-205ENST00000592333 GOLGA8FQ08AF8 430 aa19.95■□□□□ 0.78
CCDC43-205ENST00000592333 GOLGA8DPQ0D2H9 430 aa19.95■□□□□ 0.78
CCDC43-205ENST00000592333 BYSLQ13895 437 aaKnown RBP19.95■□□□□ 0.78
CCDC43-205ENST00000592333 SPDYCQ5MJ68 293 aa19.95■□□□□ 0.78
CCDC43-205ENST00000592333 C1orf220Q5T0J3 134 aa19.95■□□□□ 0.78
CCDC43-205ENST00000592333 SCARA5Q6ZMJ2 495 aa19.95■□□□□ 0.78
CCDC43-205ENST00000592333 HTR3DQ70Z44 454 aa19.95■□□□□ 0.78
CCDC43-205ENST00000592333 IL17RCQ8NAC3 791 aa19.95■□□□□ 0.78
CCDC43-205ENST00000592333 ZMIZ2Q8NF64 920 aa19.95■□□□□ 0.78
CCDC43-205ENST00000592333 OLIG1Q8TAK6 271 aa19.95■□□□□ 0.78
CCDC43-205ENST00000592333 NACA2Q9H009 215 aa19.95■□□□□ 0.78
CCDC43-205ENST00000592333 ARHGEF4Q9NR80 690 aa19.95■□□□□ 0.78
CCDC43-205ENST00000592333 PCDHA5Q9Y5H7 936 aa19.95■□□□□ 0.78
CCDC43-205ENST00000592333 HLA-DRAP01903 254 aa19.94■□□□□ 0.78
CCDC43-205ENST00000592333 FAM200BP0CF97 657 aa19.94■□□□□ 0.78
CCDC43-205ENST00000592333 CHRM1P11229 460 aaPredicted RBP19.94■□□□□ 0.78
CCDC43-205ENST00000592333 KRT13P13646 458 aa19.94■□□□□ 0.78
CCDC43-205ENST00000592333 NR2F2P24468 414 aa19.94■□□□□ 0.78
CCDC43-205ENST00000592333 PIK3CAP42336 1068 aa19.94■□□□□ 0.78
CCDC43-205ENST00000592333 DPP6P42658 865 aa19.94■□□□□ 0.78
CCDC43-205ENST00000592333 DPYDQ12882 1025 aa19.94■□□□□ 0.78
CCDC43-205ENST00000592333 SF3A2Q15428 464 aaKnown RBP19.94■□□□□ 0.78
CCDC43-205ENST00000592333 LY6G5CQ5SRR4 150 aa19.94■□□□□ 0.78
CCDC43-205ENST00000592333 PMS2CLQ68D20 193 aa19.94■□□□□ 0.78
CCDC43-205ENST00000592333 ETFBKMTQ8IXQ9 262 aa19.94■□□□□ 0.78
CCDC43-205ENST00000592333 CCDC150Q8NCX0 1101 aa19.94■□□□□ 0.78
CCDC43-205ENST00000592333 NT5C1AQ9BXI3 368 aa19.94■□□□□ 0.78
CCDC43-205ENST00000592333 CCSER2Q9H7U1 834 aa19.94■□□□□ 0.78
CCDC43-205ENST00000592333 SPHK2Q9NRA0 654 aa19.94■□□□□ 0.78
CCDC43-205ENST00000592333 GMIPQ9P107 970 aa19.94■□□□□ 0.78
CCDC43-205ENST00000592333 DEC1Q9P2X7 70 aa19.94■□□□□ 0.78
CCDC43-205ENST00000592333 SCML2Q9UQR0 700 aa19.94■□□□□ 0.78
CCDC43-205ENST00000592333 SPTBN2O15020 2390 aa19.94■□□□□ 0.78
CCDC43-205ENST00000592333 TLR5O60602 858 aa19.93■□□□□ 0.78
CCDC43-205ENST00000592333 CAVIN2O95810 425 aa19.93■□□□□ 0.78
CCDC43-205ENST00000592333 PSMC2P35998 433 aaKnown RBP19.93■□□□□ 0.78
CCDC43-205ENST00000592333 ATP5C1P36542 298 aaKnown RBP19.93■□□□□ 0.78
CCDC43-205ENST00000592333 SLC6A11P48066 632 aa19.93■□□□□ 0.78
CCDC43-205ENST00000592333 PSEN1P49768 467 aa19.93■□□□□ 0.78
CCDC43-205ENST00000592333 NDUFA8P51970 172 aa19.93■□□□□ 0.78
CCDC43-205ENST00000592333 SEC13P55735 322 aa19.93■□□□□ 0.78
CCDC43-205ENST00000592333 MAP3K7CLP57077 242 aa19.93■□□□□ 0.78
CCDC43-205ENST00000592333 EDRF1Q3B7T1 1238 aa19.93■□□□□ 0.78
CCDC43-205ENST00000592333 STPG1Q5TH74 334 aa19.93■□□□□ 0.78
CCDC43-205ENST00000592333 KRBA2Q6ZNG9 492 aa19.93■□□□□ 0.78
CCDC43-205ENST00000592333 TADA2BQ86TJ2 420 aa19.93■□□□□ 0.78
CCDC43-205ENST00000592333 PHTF2Q8N3S3 785 aa19.93■□□□□ 0.78
CCDC43-205ENST00000592333 MDGA1Q8NFP4 955 aa19.93■□□□□ 0.78
CCDC43-205ENST00000592333 WHAMMQ8TF30 809 aa19.93■□□□□ 0.78
CCDC43-205ENST00000592333 CYFIP2Q96F07 1278 aa19.93■□□□□ 0.78
CCDC43-205ENST00000592333 STARD13Q9Y3M8 1113 aa19.93■□□□□ 0.78
CCDC43-205ENST00000592333 BEST1O76090 585 aa19.92■□□□□ 0.78
CCDC43-205ENST00000592333 CCDC130P13994 396 aa19.92■□□□□ 0.78
CCDC43-205ENST00000592333 GBP1P32455 592 aa19.92■□□□□ 0.78
CCDC43-205ENST00000592333 CREB5Q02930 508 aa19.92■□□□□ 0.78
CCDC43-205ENST00000592333 ADAM9Q13443 819 aa19.92■□□□□ 0.78
CCDC43-205ENST00000592333 ANO7Q6IWH7 933 aa19.92■□□□□ 0.78
CCDC43-205ENST00000592333 CLEC20AQ6ZU45 233 aa19.92■□□□□ 0.78
CCDC43-205ENST00000592333 FAM186BQ8IYM0 893 aa19.92■□□□□ 0.78
CCDC43-205ENST00000592333 CCDC33Q8N5R6 958 aa19.92■□□□□ 0.78
CCDC43-205ENST00000592333 ALLCQ8N6M5 410 aa19.92■□□□□ 0.78
CCDC43-205ENST00000592333 TXNDC5Q8NBS9 432 aaKnown RBP19.92■□□□□ 0.78
CCDC43-205ENST00000592333 CDK5RAP1Q96SZ6 601 aaKnown RBP19.92■□□□□ 0.78
CCDC43-205ENST00000592333 LSM14BQ9BX40 385 aaKnown RBP19.92■□□□□ 0.78
CCDC43-205ENST00000592333 NIF3L1Q9GZT8 377 aa19.92■□□□□ 0.78
CCDC43-205ENST00000592333 TMEM8AQ9HCN3 771 aa19.92■□□□□ 0.78
CCDC43-205ENST00000592333 WDR35Q9P2L0 1181 aa19.92■□□□□ 0.78
CCDC43-205ENST00000592333 ZDHHC9Q9Y397 364 aa19.92■□□□□ 0.78
CCDC43-205ENST00000592333 SDK1Q7Z5N4 2213 aa19.91■□□□□ 0.78
CCDC43-205ENST00000592333 DCLK1O15075 740 aa19.91■□□□□ 0.78
CCDC43-205ENST00000592333 STX10O60499 249 aa19.91■□□□□ 0.78
CCDC43-205ENST00000592333 CILPO75339 1184 aa19.91■□□□□ 0.78
CCDC43-205ENST00000592333 KLF8O95600 359 aaPredicted RBP19.91■□□□□ 0.78
CCDC43-205ENST00000592333 KRT39Q6A163 491 aa19.91■□□□□ 0.78
CCDC43-205ENST00000592333 TMEM92Q6UXU6 159 aa19.91■□□□□ 0.78
CCDC43-205ENST00000592333 C12orf40Q86WS4 652 aa19.91■□□□□ 0.78
CCDC43-205ENST00000592333 BBS7Q8IWZ6 715 aa19.91■□□□□ 0.78
CCDC43-205ENST00000592333 C12orf29Q8N999 325 aa19.91■□□□□ 0.78
CCDC43-205ENST00000592333 SPACA7Q96KW9 195 aa19.91■□□□□ 0.78
CCDC43-205ENST00000592333 KLF16Q9BXK1 252 aaPredicted RBP19.91■□□□□ 0.78
CCDC43-205ENST00000592333 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.91■□□□□ 0.782e-12■■■■■ 298.1
CCDC43-205ENST00000592333 MARK1Q9P0L2 795 aa19.91■□□□□ 0.78
CCDC43-205ENST00000592333 HMGXB4Q9UGU5 601 aa19.91■□□□□ 0.78
CCDC43-205ENST00000592333 LSM7Q9UK45 103 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms