RNA–Protein interactions for RNA: ENST00000592299.5

SPHK1-210, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-210ENST00000592299 ATP13A4Q4VNC1 1196 aa23.82■■□□□ 1.4
SPHK1-210ENST00000592299 ACTRT1Q8TDG2 376 aa23.82■■□□□ 1.4
SPHK1-210ENST00000592299 GRXCR1A8MXD5 290 aa23.82■■□□□ 1.4
SPHK1-210ENST00000592299 PGRMC1O00264 195 aaKnown RBP23.82■■□□□ 1.4
SPHK1-210ENST00000592299 MYOGP15173 224 aa23.82■■□□□ 1.4
SPHK1-210ENST00000592299 TFE3P19532 575 aaPredicted RBP23.82■■□□□ 1.4
SPHK1-210ENST00000592299 PTPN9P43378 593 aa23.82■■□□□ 1.4
SPHK1-210ENST00000592299 RAB6CQ53S08 254 aa23.82■■□□□ 1.4
SPHK1-210ENST00000592299 ODF2Q5BJF6 829 aa23.82■■□□□ 1.4
SPHK1-210ENST00000592299 LRRC38Q5VT99 294 aa23.82■■□□□ 1.4
SPHK1-210ENST00000592299 TXNRD3NBQ6F5E7 133 aa23.82■■□□□ 1.4
SPHK1-210ENST00000592299 RASGEF1CQ8N431 466 aa23.82■■□□□ 1.4
SPHK1-210ENST00000592299 ZNF461Q8TAF7 563 aa23.82■■□□□ 1.4
SPHK1-210ENST00000592299 IRGQQ8WZA9 623 aa23.82■■□□□ 1.4
SPHK1-210ENST00000592299 RAB6CQ9H0N0 254 aa23.82■■□□□ 1.4
SPHK1-210ENST00000592299 ZBP1Q9H171 429 aa23.82■■□□□ 1.4
SPHK1-210ENST00000592299 KLHL11Q9NVR0 708 aa23.82■■□□□ 1.4
SPHK1-210ENST00000592299 USP18Q9UMW8 372 aa23.82■■□□□ 1.4
SPHK1-210ENST00000592299 LINC01553A4QN01 128 aa23.81■■□□□ 1.4
SPHK1-210ENST00000592299 FGGP02679 453 aa23.81■■□□□ 1.4
SPHK1-210ENST00000592299 NCAM1P13591 858 aa23.81■■□□□ 1.4
SPHK1-210ENST00000592299 NOS2P35228 1153 aa23.81■■□□□ 1.4
SPHK1-210ENST00000592299 PCK1P35558 622 aa23.81■■□□□ 1.4
SPHK1-210ENST00000592299 SLC25A11Q02978 314 aaKnown RBP23.81■■□□□ 1.4
SPHK1-210ENST00000592299 SMC1AQ14683 1233 aaKnown RBP23.81■■□□□ 1.4
SPHK1-210ENST00000592299 SMTNL2Q2TAL5 461 aa23.81■■□□□ 1.4
SPHK1-210ENST00000592299 SCYL2Q6P3W7 929 aa23.81■■□□□ 1.4
SPHK1-210ENST00000592299 BHLHA9Q7RTU4 235 aa23.81■■□□□ 1.4
SPHK1-210ENST00000592299 CCDC50Q8IVM0 306 aa23.81■■□□□ 1.4
SPHK1-210ENST00000592299 SCML4Q8N228 414 aa23.81■■□□□ 1.4
SPHK1-210ENST00000592299 ALG13Q9NP73 1137 aaKnown RBP23.81■■□□□ 1.4
SPHK1-210ENST00000592299 AFF4Q9UHB7 1163 aaKnown RBP23.81■■□□□ 1.4
SPHK1-210ENST00000592299 NAALADL1Q9UQQ1 740 aa23.81■■□□□ 1.4
SPHK1-210ENST00000592299 PRPSAP2O60256 369 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 CSPG5O95196 566 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 ZRANB2O95218 330 aaKnown RBP eCLIP23.8■■□□□ 1.4
SPHK1-210ENST00000592299 KRT7P08729 469 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 CTSAP10619 480 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 IL1R2P27930 398 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 SULT1E1P49888 294 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 RPL10AP62906 217 aaKnown RBP23.8■■□□□ 1.4
SPHK1-210ENST00000592299 LLGL1Q15334 1064 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 KCNT1Q5JUK3 1230 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 SYPL2Q5VXT5 272 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 FAM109BQ6ICB4 259 aaPredicted RBP23.8■■□□□ 1.4
SPHK1-210ENST00000592299 DENND5BQ6ZUT9 1274 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 TMC7Q7Z402 723 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 KATNAL2Q8IYT4 538 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 ACSF2Q96CM8 615 aaPredicted RBP23.8■■□□□ 1.4
SPHK1-210ENST00000592299 SLC2A13Q96QE2 648 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 TBCBQ99426 244 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.8■■□□□ 1.4
SPHK1-210ENST00000592299 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.8■■□□□ 1.4
SPHK1-210ENST00000592299 MTUS1Q9ULD2 1270 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 STAP1Q9ULZ2 295 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 V9GYY5 206 aaPredicted RBP23.8■■□□□ 1.4
SPHK1-210ENST00000592299 PLXNA4Q9HCM2 1894 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 CEP290O15078 2479 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 LONRF2Q1L5Z9 754 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 SLC25A52Q3SY17 297 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 BSPRYQ5W0U4 402 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 TPGS2Q68CL5 300 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 POLNQ7Z5Q5 900 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 SPATA4Q8NEY3 305 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 EDEM1Q92611 657 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 C17orf80Q9BSJ5 609 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 FBXO44Q9H4M3 255 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 SSX2IPQ9Y2D8 614 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 RWDD3Q9Y3V2 267 aa23.8■■□□□ 1.4
SPHK1-210ENST00000592299 EFCAB8A8MWE9 144 aa23.79■■□□□ 1.4
SPHK1-210ENST00000592299 TADA3O75528 432 aa23.79■■□□□ 1.4
SPHK1-210ENST00000592299 ABLIM3O94929 683 aa23.79■■□□□ 1.4
SPHK1-210ENST00000592299 KRT1P04264 644 aa23.79■■□□□ 1.4
SPHK1-210ENST00000592299 FYNP06241 537 aa23.79■■□□□ 1.4
SPHK1-210ENST00000592299 ATF2P15336 505 aa23.79■■□□□ 1.4
SPHK1-210ENST00000592299 TUFMP49411 452 aaKnown RBP23.79■■□□□ 1.4
SPHK1-210ENST00000592299 C2orf54Q08AI8 447 aa23.79■■□□□ 1.4
SPHK1-210ENST00000592299 ADAT2Q7Z6V5 191 aaKnown RBP23.79■■□□□ 1.4
SPHK1-210ENST00000592299 GIPC2Q8TF65 315 aa23.79■■□□□ 1.4
SPHK1-210ENST00000592299 RNF25Q96BH1 459 aaPredicted RBP23.79■■□□□ 1.4
SPHK1-210ENST00000592299 RPGRIP1Q96KN7 1286 aa23.79■■□□□ 1.4
SPHK1-210ENST00000592299 NCAPGQ9BPX3 1015 aa23.79■■□□□ 1.4
SPHK1-210ENST00000592299 C11orf84Q9BUA3 381 aaPredicted RBP23.79■■□□□ 1.4
SPHK1-210ENST00000592299 ADAM33Q9BZ11 813 aa23.79■■□□□ 1.4
SPHK1-210ENST00000592299 CYP4F11Q9HBI6 524 aa23.79■■□□□ 1.4
SPHK1-210ENST00000592299 DDX56Q9NY93 547 aaKnown RBP23.79■■□□□ 1.4
SPHK1-210ENST00000592299 TTC7AQ9ULT0 858 aaPredicted RBP23.79■■□□□ 1.4
SPHK1-210ENST00000592299 SYNJ2BP-COX16A0A087WUM0 186 aa23.78■■□□□ 1.4
SPHK1-210ENST00000592299 UQCRHLA0A096LP55 91 aa23.78■■□□□ 1.4
SPHK1-210ENST00000592299 TEX28O15482 410 aa23.78■■□□□ 1.4
SPHK1-210ENST00000592299 CXCL14O95715 111 aa23.78■■□□□ 1.4
SPHK1-210ENST00000592299 TRUB2O95900 331 aaKnown RBP23.78■■□□□ 1.4
SPHK1-210ENST00000592299 UQCRHP07919 91 aa23.78■■□□□ 1.4
SPHK1-210ENST00000592299 HDAC4P56524 1084 aa23.78■■□□□ 1.4
SPHK1-210ENST00000592299 USP46P62068 366 aa23.78■■□□□ 1.4
SPHK1-210ENST00000592299 CREMQ03060 361 aa23.78■■□□□ 1.4
SPHK1-210ENST00000592299 RAB33AQ14088 237 aa23.78■■□□□ 1.4
SPHK1-210ENST00000592299 TEX35Q5T0J7 233 aa23.78■■□□□ 1.4
SPHK1-210ENST00000592299 ZNF572Q7Z3I7 529 aaPredicted RBP23.78■■□□□ 1.4
SPHK1-210ENST00000592299 GPR65Q8IYL9 337 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms