RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 GRK3P35626 688 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 NRIP1P48552 1158 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 POLGP54098 1239 aaPredicted RBP8.29□□□□□ -1.08
VMP1-213ENST00000591877 UBE3AQ05086 875 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 TRIM29Q14134 588 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 EMC2Q15006 297 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 CLUL1Q15846 466 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 NKPD1Q17RQ9 610 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 LONRF3Q496Y0 759 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 UBXN11Q5T124 520 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 NXNQ6DKJ4 435 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 SYDE1Q6ZW31 735 aaPredicted RBP8.29□□□□□ -1.08
VMP1-213ENST00000591877 OTUD6AQ7L8S5 288 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 CATSPER4Q7RTX7 472 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 RBM23Q86U06 439 aaKnown RBP8.29□□□□□ -1.08
VMP1-213ENST00000591877 SPACA3Q8IXA5 215 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 CHPFQ8IZ52 775 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 LRRC43Q8N309 656 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 EFHBQ8N7U6 833 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 FBXO18Q8NFZ0 1043 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 VN1R2Q8NFZ6 395 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 PSPC1Q8WXF1 523 aaKnown RBP8.29□□□□□ -1.08
VMP1-213ENST00000591877 C8orf76Q96K31 380 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 ZSCAN31Q96LW9 406 aaPredicted RBP8.29□□□□□ -1.08
VMP1-213ENST00000591877 SMAD5Q99717 465 aaKnown RBP8.29□□□□□ -1.08
VMP1-213ENST00000591877 JPH2Q9BR39 696 aaPredicted RBP8.29□□□□□ -1.08
VMP1-213ENST00000591877 YIPF4Q9BSR8 244 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 INO80BQ9C086 356 aaPredicted RBP8.29□□□□□ -1.08
VMP1-213ENST00000591877 TLR9Q9NR96 1032 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 AGPAT5Q9NUQ2 364 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 DACT1Q9NYF0 836 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 ZIM2Q9NZV7 527 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 PIN4Q9Y237 131 aaKnown RBP8.29□□□□□ -1.08
VMP1-213ENST00000591877 NT5C1B-RDH14C9J2C7 533 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 ZNF623O75123 536 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 MED24O75448 989 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 OFD1O75665 1012 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 RFPL1O75677 317 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 RARRES1P49788 294 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 KPNA1P52294 538 aaPredicted RBP8.28□□□□□ -1.08
VMP1-213ENST00000591877 SESN3P58005 492 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 ZP2Q05996 745 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 LSAMPQ13449 338 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 KCNC3Q14003 757 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 ZNF174Q15697 407 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 SMAD2Q15796 467 aaKnown RBP8.28□□□□□ -1.08
VMP1-213ENST00000591877 TWF2Q6IBS0 349 aaKnown RBP8.28□□□□□ -1.08
VMP1-213ENST00000591877 SLC23A3Q6PIS1 610 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 TTLL10Q6ZVT0 673 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 SRGAP1Q7Z6B7 1085 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 MRPL10Q7Z7H8 261 aaKnown RBP8.28□□□□□ -1.08
VMP1-213ENST00000591877 TMEM173Q86WV6 379 aaPredicted RBP8.28□□□□□ -1.08
VMP1-213ENST00000591877 CATSPER3Q86XQ3 398 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 EXOC8Q8IYI6 725 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 THNSL1Q8IYQ7 743 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 SLC39A11Q8N1S5 342 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 NXPE1Q8N323 547 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 C4orf32Q8N8J7 132 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 RNF149Q8NC42 400 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 PIGOQ8TEQ8 1089 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 COG1Q8WTW3 980 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 MRPS27Q92552 414 aaKnown RBP8.28□□□□□ -1.08
VMP1-213ENST00000591877 ZNF558Q96NG5 402 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 FOXP1Q9H334 677 aaPredicted RBP8.28□□□□□ -1.08
VMP1-213ENST00000591877 ANKEF1Q9NU02 776 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 RAPGEFL1Q9UHV5 662 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 BARX2Q9UMQ3 279 aaPredicted RBP8.28□□□□□ -1.08
VMP1-213ENST00000591877 LZTS1Q9Y250 596 aa8.28□□□□□ -1.08
VMP1-213ENST00000591877 TIMM13Q9Y5L4 95 aaPredicted RBP8.28□□□□□ -1.08
VMP1-213ENST00000591877 TRIOO75962 3097 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.27□□□□□ -1.09
VMP1-213ENST00000591877 HIDE1A8MVS5 230 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.27□□□□□ -1.09
VMP1-213ENST00000591877 PI4K2BG5E9Z4 385 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 ASAP2O43150 1006 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 PRKD3O94806 890 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 ABLIM3O94929 683 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 CEACAM5P06731 702 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 GLRA2P23416 452 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 ARL2P36404 184 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 TECP42680 631 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 NDUFV1P49821 464 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 TOB1P50616 345 aaPredicted RBP8.27□□□□□ -1.09
VMP1-213ENST00000591877 BCAR1P56945 870 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 PTENP60484 403 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 RPL11P62913 178 aaKnown RBP8.27□□□□□ -1.09
VMP1-213ENST00000591877 KRT85P78386 507 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 HMGN5P82970 282 aaKnown RBP8.27□□□□□ -1.09
VMP1-213ENST00000591877 CAPSQ13938 189 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 SAFBQ15424 915 aaKnown RBP eCLIP8.27□□□□□ -1.09
VMP1-213ENST00000591877 DUSP6Q16828 381 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 PLPP4Q5VZY2 271 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 ZNF280BQ86YH2 543 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 WDR75Q8IWA0 830 aaKnown RBP8.27□□□□□ -1.09
VMP1-213ENST00000591877 MYO1HQ8N1T3 1032 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 Q8N1Y9 231 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 TCP11Q8WWU5 503 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 FOXP3Q9BZS1 431 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 SLC13A1Q9BZW2 595 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 NRDE2Q9H7Z3 1164 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms