RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 MAPK7Q13164 816 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 NAPEPLDQ6IQ20 393 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 SPATA18Q8TC71 538 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 ZSWIM1Q9BR11 485 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 GOLPH3Q9H4A6 298 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 FBXO44Q9H4M3 255 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 NOD2Q9HC29 1040 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 NPM3O75607 178 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 CCDC159P0C7I6 412 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 COPAP53621 1224 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 STX5Q13190 355 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 MTA1Q13330 715 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 ZNF720Q7Z2F6 126 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 SUGP1Q8IWZ8 645 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 SPATA17Q96L03 361 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 ANKRD27Q96NW4 1050 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 CBWD1Q9BRT8 395 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 PALMDQ9NP74 551 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 UXTQ9UBK9 157 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 FBXL21Q9UKT6 434 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 PRR23AA6NEV1 266 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 ACKR2O00590 384 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 STX7O15400 261 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 ANXA9O76027 345 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 SERPIND1P05546 499 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 RBP3P10745 1247 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 ACADMP11310 421 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 TUFMP49411 452 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 FOXD4Q12950 439 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 SLC29A2Q14542 456 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 C6orf10Q5SRN2 563 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 PRPF39Q86UA1 669 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 CCT7Q99832 543 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 ADAM2Q99965 735 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 C20orf96Q9NUD7 363 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 CRLS1Q9UJA2 301 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 CXCL8P10145 99 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 LINC00523Q86TU6 105 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 NT5DC4Q86YG4 428 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 CARNMT1Q8N4J0 409 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 IPMKQ8NFU5 416 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 CIPCQ9C0C6 399 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 C10orf88Q9H8K7 445 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 DDX43Q9NXZ2 648 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 VPS9D1Q9Y2B5 631 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 OXCT1P55809 520 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 CRY2Q49AN0 593 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 MDH1BQ5I0G3 518 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 ZPBP2Q6X784 338 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 UNC45BQ8IWX7 931 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 CERS5Q8N5B7 392 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 SPIRE2Q8WWL2 714 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 ZNF518BQ9C0D4 1074 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 CSDE1O75534 798 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 HNRNPH1P31943 449 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 RARRES1P49788 294 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 KCNK10P57789 538 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 RHBDL3P58872 404 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 EIF2B5Q13144 721 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 SLC25A41Q8N5S1 370 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 SLC5A5Q92911 643 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 MAGEB18Q96M61 343 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 IGFLR1Q9H665 355 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 WHRNQ9P202 907 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 UMODL1Q5DID0 1318 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 AIM2O14862 343 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 CST8O60676 142 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 PGK1P00558 417 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 H2AFXP16104 143 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 SERPINB3P29508 390 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 CELF3Q5SZQ8 465 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 MOB2Q70IA6 237 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 APBB2Q92870 758 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 ZNF558Q96NG5 402 aa13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-216ENST00000591545 KNDC1Q76NI1 1749 aa13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 NFASCO94856 1347 aa13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 EIF4E1BA6NMX2 242 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 M0R3G1 203 aa13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 GLRA3O75311 464 aa13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 SEC24CP53992 1094 aa13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 CYP24A1Q07973 514 aa13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 EPC2Q52LR7 807 aa13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 PAPD7Q5XG87 772 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 ACAD10Q6JQN1 1059 aa13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 CYB5D1Q6P9G0 228 aa13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 NECAB2Q7Z6G3 386 aa13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 CYGBQ8WWM9 190 aa13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 CAPNS2Q96L46 248 aa13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 PRPF18Q99633 342 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 FTHL17Q9BXU8 183 aa13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 CYP39A1Q9NYL5 469 aa13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 MARCOQ9UEW3 520 aaPredicted RBP13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 CLASP2O75122 1294 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 RHOCP08134 193 aa13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 BBS7Q8IWZ6 715 aa13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 FUT8Q9BYC5 575 aa13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 UBXN6Q9BZV1 441 aa13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 VPS28Q9UK41 221 aa13.75□□□□□ -0.21
SMARCA4-216ENST00000591545 MAP3K7CLP57077 242 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms